Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq434 125 1e-23 >seq434 Length=564148 Score = 125 bits (138), Expect = 1e-23 Identities = 421/649 (65%), Gaps = 10/649 (2%) Strand=Plus/Minus Query 94399 CCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAGG 94458 || || || || || |||||||||| |||| |||||| ||||||| ||| |||| ||| Sbjct 552365 CCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGG 552306 Query 94459 CCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTCC 94515 |||||||| |||| ||||||||| |||| ||| || ||| |||| || | || | Sbjct 552305 CCAGGGCATTCGTTGGGGCACATGAGGGTCCA---CTCGCCATTCTTCTCGACACGCTTC 552249 Query 94516 ATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATCCCTCGTCCTCAAATCTTCATTA 94575 |||||||| || | | ||| | ||| |||||||||| | | | | ||||| || Sbjct 552248 ATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTG 552189 Query 94576 CCGGCATTCTTTCTGCAGTCAATAAAGTCCTTCACGTCCAGATGCCAATCAGAAATATAG 94635 ||| ||||||| ||| | || || || ||| |||||| | |||| Sbjct 552188 CCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAG 552129 Query 94636 ATGGCTGCAGCTCCTCTCCTCTTGTCTCCTCCCTGGCTAACCTTTTTCACAGAGACGTTA 94695 ||||| ||| || ||||||| || |||||| || | | | ||| | || Sbjct 552128 ATGGCAAAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTG 552069 Query 94696 AAGATTTGGAGGAACGCCATGAGACCAGGGTGGGTACCACTCCATGAC-GAAATGGGGCT 94754 |||| |||| | | | | ||| ||| || | || | | |||| Sbjct 552068 AAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCC-GTTAGTGCCGGCAATGTATGA 552010 Query 94755 TCCTTTTGCCCTCAAATCATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGAT 94814 || | || | | || | || || || | || || || |||||||||| || Sbjct 552009 GCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCAT 551950 Query 94815 TGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAG 94874 || |||||| || || || |||||||||||||| || || | | | | | || Sbjct 551949 GGCGCAGGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAG 551890 Query 94875 GAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATG 94934 |||||| || || || || | | ||||||| ||| || || || ||||| ||||| Sbjct 551889 GAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATG 551830 Query 94935 GGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATC 94993 ||| || || | || |||||||| | ||| || | || || | | || | | | Sbjct 551829 GGTGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACC 551770 Query 94994 CGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGGCGCTCAAC 95042 | | |||||||||||||||||||| ||||||| ||| || | ||| || Sbjct 551769 CCAG-ATGCCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGAC 551722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989574554111475