Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq434 176 6e-39
seq334 107 2e-18
>seq434
Length=564148
Score = 176 bits (194), Expect = 6e-39
Identities = 734/1150 (64%), Gaps = 14/1150 (1%)
Strand=Plus/Minus
Query 62939 CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62998
||| |||| || |||| || || || || ||||| | || | | || | || ||
Sbjct 552585 CAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGAT 552526
Query 62999 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63058
||||||||| || || | ||||| || | || | || || ||||| |||
Sbjct 552525 CTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTT 552466
Query 63059 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63118
|| |||||| ||||| ||||| || | ||||| ||| |||||| ||| | ||| ||
Sbjct 552465 GCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGC 552406
Query 63119 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAG 63177
| ||| | | || ||||||| || | | | | ||| ||||||
Sbjct 552405 ATACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGCTTCGTACTTCT 552347
Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237
|||| || |||||||| || | |||| | | | | ||| ||||| | || |
Sbjct 552346 CGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGC 552287
Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297
|||| | | |||||| || | | || || || ||||| ||||| || ||||||||||
Sbjct 552286 ACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAA 552227
Query 63298 GAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63357
|||| | || ||||| | | | ||| || || || |||||| ||| || |
Sbjct 552226 GAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCA 552167
Query 63358 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63417
||||| | | || ||| || ||||| || || | || ||||| | | | ||||| | |
Sbjct 552166 GGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCT 552107
Query 63418 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63477
|||| || ||||| |||| ||||||||| |||||||| | || | | ||| || | ||
Sbjct 552106 TGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAA 552047
Query 63478 TACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAA 63537
||||||| || | || || || |||| || || || | || ||||| |
Sbjct 552046 TACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGA 551987
Query 63538 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCA 63596
| ||||| || || || ||||| || ||||| | ||||| || |||| |||||
Sbjct 551986 TGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCG 551928
Query 63597 TAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63656
||||| || || ||||| || || |||||| || || || ||| || | ||
Sbjct 551927 TAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCC 551868
Query 63657 CGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 63716
| | ||||| ||||| || | || || || || || || || |||| || |
Sbjct 551867 TGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATG 551808
Query 63717 AGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGAC 63772
|| || || |||| ||| | || | ||| || |||| || || || ||
Sbjct 551807 AGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAGCCAC 551752
Query 63773 ACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGA 63832
|||||| | ||||||||| ||||| || || || || | || | || | || || ||
Sbjct 551751 ACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGA 551692
Query 63833 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 63892
| |||||||| || || || || || | ||| ||||||| || || | ||| |
Sbjct 551691 TCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGC 551632
Query 63893 CGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACTT-GAAATAATCG 63951
|| | | | ||||| | | | | || | | | | | | ||| || || || |
Sbjct 551631 AGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAG 551573
Query 63952 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 64011
|||| | || | || || || || ||||||| | | | ||| || || ||
Sbjct 551572 GAGATGGCTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCAGACC 551513
Query 64012 ATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCAT 64071
| | || || || | ||||||||| ||||| | ||| || | || || || |||||||
Sbjct 551512 ACTGCTTCTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATGGCAT 551453
Query 64072 AATCCGGATG 64081
| || || ||
Sbjct 551452 AGTCTGGGTG 551443
>seq334
Length=652976
Score = 107 bits (118), Expect = 2e-18
Identities = 245/368 (67%), Gaps = 3/368 (1%)
Strand=Plus/Minus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| ||| ||| ||||||||||| | || | |||||||| || || ||
Sbjct 128924 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGG 128865
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| || |||||||| || ||||| || ||||| ||||| | ||| ||||||
Sbjct 128864 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAG 128805
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758
|| || || || || |||||||| || | | || | | || |||||
Sbjct 128804 ATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCG 128745
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
||||| | | ||||| || |||||| | | ||||| || || || ||||| ||
Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTG 128685
Query 33819 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33878
||||||| | | || | || || | || || || || | ||| || |
Sbjct 128684 AAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTC 128625
Query 33879 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33938
|| || || ||||| || || ||||| || |||||||| |||| ||||||| ||||
Sbjct 128624 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATC 128565
Query 33939 TGCACTTC 33946
|| || ||
Sbjct 128564 TGGACCTC 128557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629811734823600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |