Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq434 187 3e-42
>seq434
Length=564148
Score = 187 bits (206), Expect = 3e-42
Identities = 588/903 (65%), Gaps = 20/903 (2%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
|| |||||||| || | |||| | | | ||||| ||||| | || ||||| | | |
Sbjct 552335 TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTC 552276
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
||||| || | | || || || ||||| ||||| || |||||||||||||| | ||
Sbjct 552275 CACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA 552216
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 66161
| ||| | || | ||| || || || |||||| ||| || |||||| | | |
Sbjct 552215 AGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156
Query 66162 ATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 66221
| ||| | ||||| || || | || ||||| | | | ||||| | ||||| || |||
Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCC 552096
Query 66222 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 66281
|| |||| ||||||||| |||||||| | || | | ||| || | |||||| || ||
Sbjct 552095 TGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAG 552036
Query 66282 GTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCT 66341
|| || || || |||| || || || | || ||||| || |||||
Sbjct 552035 GTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCA 551976
Query 66342 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTC 66400
|| || || ||||| || ||||| | ||||| || |||| || || ||||| |||||
Sbjct 551975 ATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 66401 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AG 66456
|| || || ||| |||||| || || || ||| || | | ||| | || |
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA-GCCTGGGGTG 551861
Query 66457 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT 66516
|||| ||||| || | || || || || || || || |||| || | || || |
Sbjct 551860 TTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTAT 551801
Query 66517 ACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATT 66572
| |||| ||| | || | ||| || |||| || || || ||||||||
Sbjct 551800 AGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAGCCACACGCATG 551745
Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 66632
| ||||||||| ||||| || |||||||| | || | || | || || ||| |||
Sbjct 551744 ATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCC 551685
Query 66633 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 66692
||||| || || || || || | ||| ||||||| || || | ||| | ||||
Sbjct 551684 AAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCA 551625
Query 66693 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATCGGAGAATG 66751
| | ||||| | | | | || ||| | | | | ||| || || || ||||| |
Sbjct 551624 AAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGG 551566
Query 66752 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 66811
|| | || || || |||||||||| | | | ||| || || || | | ||
Sbjct 551565 CTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTT 551506
Query 66812 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGG 66871
|| || | |||||||| ||||| ||||| || | || || | |||||||| || ||
Sbjct 551505 CTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGG 551446
Query 66872 ATG 66874
||
Sbjct 551445 GTG 551443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658166670765800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |