Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq137 125 6e-24 >seq137 Length=246627 Score = 125 bits (138), Expect = 6e-24 Identities = 163/219 (74%), Gaps = 10/219 (5%) Strand=Plus/Plus Query 20879 CTTCAGCCGCGGAAACGGACGCGGGGTCCTC-CGCA-GCTGAAGCAGCAGGGGATCAACG 20936 ||| ||| ||||||||| || || | ||| | || |||| | | ||||| || || Sbjct 148041 CTTTAGCTCCGGAAACGGCCGTGG--TTCTCGCTCAAGCTGGACCTTCAGGGCGTCCACA 148098 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCA--AGGTGTGCACAAAGTCTCCCGGGGTCAGGC 20994 || | | ||| ||||||||||| |||| | ||||| || |||||||| | | Sbjct 148099 TGATCGACGTACACGTGGGCGTCGCCCATAACGTGTGTT---AGGCTCCCGGGAACCAGA 148155 Query 20995 CCGTG-ACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 || ||||| |||| || || |||||| || ||||| || ||||||||||| ||||| Sbjct 148156 TCGCATACGTGCGCGAGCATATGCGTCAGCAGCGCGTAACTTGCGATGTTAAATGGGACA 148215 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 ||||||||||||||| ||||| |||||||||||||||| Sbjct 148216 CCGAGGCCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 148254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427772115927600