Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq434 232 1e-55 seq334 107 3e-18 >seq434 Length=564148 Score = 232 bits (256), Expect = 1e-55 Identities = 1316/2070 (64%), Gaps = 59/2070 (3%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| || || ||||||| |||| || ||||| || |||||||| || || || || Sbjct 553487 GTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTCTTCAGT 553428 Query 78778 CCGAGACTCCATCC-GTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTAT 78836 ||||| |||| || ||| ||||||||||| || | ||| | | || ||| || Sbjct 553427 CCGAGCTTCCAACCAGTA-AAATGCATACTGGTAATCTTGCCCATAGTGGGTTCTCTCAT 553369 Query 78837 ATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 ||||| |||| ||||| || || ||||| || || | ||| || ||||| | | Sbjct 553368 GTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCATCTGGAC 553309 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 | || || | |||||||||| || || || | ||| ||||| | || Sbjct 553308 AACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGGCAGGGRT 553249 Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | | |||||||| || || || || || || || | ||||| || ||| Sbjct 553248 GTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGCTATCAGA 553189 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | | || | | | | || | || || || || || ||||| || Sbjct 553188 CCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGGTTGACAACCTGGAATTCGCC 553129 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || | || | || | || ||||| ||| || || || | ||||||| || || Sbjct 553128 AGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACC 553069 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 79193 || || || | ||| || || ||||| || || ||||| || || || | | ||| Sbjct 553068 CAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACC 553009 Query 79194 -GTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 || || | | ||||| || ||||| | ||| ||||| ||||| |||||| |||| Sbjct 553008 AGTTTGCT-TAATTTTCTCCTTTAGGCTTGTCCAGTCCCAGAGATCCGACGGGGTGACAT 552950 Query 79253 TCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTGTATGTTTCATAA 79311 |||| | || ||||| || ||||| | | || | || ||| || || ||| Sbjct 552949 TCCACATGTCGTATTGAAGGATACCCTG-CGAGACAGGAGAACCTTCATAGGTAGAGTAA 552891 Query 79312 GGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCG 79371 ||||| || | ||| | || || ||| || || | | || || || ||| Sbjct 552890 GGTCCATCAACCTTGGCAATATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCG 552831 Query 79372 AAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGA-A 79429 || |||| ||| || || | | || || ||| | || || || | || | | Sbjct 552830 AAGATCTGCTTGTTCAGCTGCCTG-GCCTCTGGTGACTCGAAAGGC-ATGCGCAGCGCCA 552773 Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489 || | || || | || |||||||||| ||| || || | |||| | | || | Sbjct 552772 GGAATGTATCAGCAAGACCCTGAACACCAAGACCAATGGGACGGTGTCGCATGTT-GCTG 552714 Query 79490 TTTCAG-CTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACT 79548 || | | | ||||| | || || || || | || || ||| | || || || || Sbjct 552713 TTACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACG 552654 Query 79549 ATTACTT---TGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATC--TATTACAA 79603 | |||| | ||| ||| | | || | || ||| | ||| || ||| | Sbjct 552653 ACGACTTGAGTAACCTCATGC---AACTTCTGGAAGTCATAGGTTCCCTCGTTATAGTCA 552597 Query 79604 AC--ATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 79659 || ||| |||||| | || |||| || ||||| || ||||| | || | | Sbjct 552596 ACGAATGACGGCAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAG 552537 Query 79660 TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTA 79719 || | || || |||||||||||||| | ||| || || | || | || || Sbjct 552536 TACTCGATGATCTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTG 552477 Query 79720 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGAT 79779 ||||| ||| || |||||| ||||| ||||| || | ||||| ||| |||||| | Sbjct 552476 CTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCT 552417 Query 79780 TCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTC 79837 || | ||| || | ||| | | || ||||||| || | || | | | ||| Sbjct 552416 TCGAGAATGGCATACCACA-GCTTCTGAGCCTTAATCTT---CTGGCGGCCACGACCCTC 552361 Query 79838 T--TTCGTA-TTGT-GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCA 79893 | |||||| || | ||| | | || |||||||| || | |||||| ||| ||| Sbjct 552360 TGCTTCGTACTTCTCGTACAGGGCC--TCAAACTCGTCGCCATAGACATCGGCTAGGCCA 552303 Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 || ||||||| || ||||| | | |||||| |||| | || || || ||||| ||| Sbjct 552302 GGGCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAG 552243 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 || || |||||||||||||| | || ||||| | || | || || || || Sbjct 552242 AGGTCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGG 552183 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 |||||| ||| || |||||| | | || ||| || ||||| || || | || ||||| Sbjct 552182 TTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCA 552123 Query 80074 ATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 80133 | | | || |||| ||||| || ||||| |||| ||||||||| |||||||| | || Sbjct 552122 AAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACA 552063 Query 80134 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTG 80193 | | ||| || | |||||| || || || || || || |||| || || || | Sbjct 552062 CGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTA 552003 Query 80194 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 80253 || ||||| || ||||| || || || ||||| || ||||| | ||||| Sbjct 552002 GCGCGAATGCGGTGGATGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCA- 551944 Query 80254 CGTTTTAA-CGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACA 80312 || |||| || || ||||| ||||| ||||| || || |||||| || || || || Sbjct 551943 GGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCA 551884 Query 80313 GCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 | || | | ||| | || ||||| ||||| || | || || || || || | Sbjct 551883 GGATGAGA---GCTGA-GCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGG 551828 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC----CCAT 80424 | || |||| |||| || || || |||| ||| | || | ||| || Sbjct 551827 TGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCC 551768 Query 80425 TGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTA 80484 |||| || || || |||||||| | ||||||||| ||||| || |||||||| | Sbjct 551767 AGATG----CCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCG 551712 Query 80485 TTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 80544 | | || | || || ||| |||||||| || || || || || | ||| ||| Sbjct 551711 TCAAGCTTGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAG 551652 Query 80545 TCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATG 80604 |||| || || | ||| | |||| | | ||||| | | | | || ||| | | Sbjct 551651 TCTCTGTCATAGACAATGGCAGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACACTCGTA 551593 Query 80605 GTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 80663 | | ||| || || || ||||| | || | || || || || ||||||| | | | Sbjct 551592 GGTCTCCTTAGAGATCATAGGAGATGGCTTTCTGTTCTTTGGGTTGACATAGTGGTAGAG 551533 Query 80664 ATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTAT 80723 ||| || || || | | || || || | ||||||||| ||||| ||||| || Sbjct 551532 ATCACTGATGACAGCAGACCACTGCTTCTTGGTCTGCTTGTGTAGGTTTGACACGGCAAT 551473 Query 80724 TCTGGCGGCTAAAATGGCATAATCTGGATG 80753 | || || | |||||||| ||||| || Sbjct 551472 ACGTGCAGCGAGGATGGCATAGTCTGGGTG 551443 >seq334 Length=652976 Score = 107 bits (118), Expect = 3e-18 Identities = 281/428 (66%), Gaps = 3/428 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||| ||||||||||| | || || ||||| || || || || Sbjct 128924 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGG 128865 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || ||||| || || | || |||||| Sbjct 128864 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAG 128805 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || || || || ||||||||||| | | | || | | ||| ||||| Sbjct 128804 ATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCG 128745 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 ||||| | | ||||| || |||||| | | ||||| || || || ||||| || Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTG 128685 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 ||||||| | | || | || || | || || || || | ||| || | Sbjct 128684 AAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTC 128625 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || ||||| || || ||||| || |||||||| |||| ||||||| |||| Sbjct 128624 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATC 128565 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || || || | | ||||| || | | || || || || || ||||| || || Sbjct 128564 TGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 128505 Query 50377 AAAAACGC 50384 ||||| || Sbjct 128504 AAAAAGGC 128497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718262111121800