Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq434 187 3e-42
>seq434
Length=564148
Score = 187 bits (206), Expect = 3e-42
Identities = 588/903 (65%), Gaps = 20/903 (2%)
Strand=Plus/Minus
Query 71944 TCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGAC 72003
|| |||||||| || | ||| | ||| ||||| ||||| || || ||||| | | |
Sbjct 552335 TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTC 552276
Query 72004 CACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 72063
||||| |||| | | || || ||||| ||||| || |||||||||||||| | ||
Sbjct 552275 CACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA 552216
Query 72064 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 72123
||||| | || | || || || || |||||| ||| || |||||| | | |
Sbjct 552215 AGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156
Query 72124 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCC 72183
| ||| || ||||| || || | || ||||| | | | || || | ||||| || |||
Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCC 552096
Query 72184 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 72243
|| |||| ||||||||| |||||||| | || | | ||| || | |||||| || ||
Sbjct 552095 TGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAG 552036
Query 72244 GCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCT 72303
| || || || |||| || || || | || ||||| | || |||||
Sbjct 552035 GTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCA 551976
Query 72304 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTC 72362
|| || || ||||| || ||||| | ||||| || |||| || || ||||| |||||
Sbjct 551975 ATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 72363 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AG 72418
|| || || ||| |||||| || || || ||| || | | ||| | || |
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA-GCCTGGGGTG 551861
Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 72478
|||| ||||| || | || || || || || || || |||| |||| || || |
Sbjct 551860 TTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTAT 551801
Query 72479 ACGTCTCAATAGCTGATTCTATATC----CCATTGATGTATTCCTACCGCGACACGCATT 72534
| |||| ||| | || | ||| || |||| || || || ||||||||
Sbjct 551800 AGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAGCCACACGCATG 551745
Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594
| ||| ||||| ||||| || |||||||| | | | || | || || ||| |||
Sbjct 551744 ATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCC 551685
Query 72595 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654
||||| || || || || || | ||| ||||||| || || | ||| | || |
Sbjct 551684 AAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCA 551625
Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATG 72713
| | ||||| | | | | || | | | | | | ||| || || || ||||| |
Sbjct 551624 AAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGG 551566
Query 72714 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 72773
|| | || || || || ||||||| | | | ||| || || || | | ||
Sbjct 551565 CTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTT 551506
Query 72774 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGG 72833
|| || | ||||||||| ||||| ||||| || | || || || |||||||| |||||
Sbjct 551505 CTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGG 551446
Query 72834 ATG 72836
||
Sbjct 551445 GTG 551443
Score = 87.8 bits (96), Expect = 2e-12
Identities = 196/292 (67%), Gaps = 5/292 (2%)
Strand=Plus/Minus
Query 70788 TTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACAT 70847
||| | ||| | || ||||| || |||| || ||||||| ||||| || ||||||||
Sbjct 553500 TTCTTGGTCGACGGTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACAT 553441
Query 70848 GCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGC 70906
||| || || || ||||| |||| || |||||||||||| || | ||| ||||
Sbjct 553440 GCCAGTCTTCAGTCCGAGCTTCCAACCAGTAAAATGCATACTGGTAATCTTGCCCATAG- 553382
Query 70907 TAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTG 70966
| || || ||||| || |||| ||| || || || ||||| || || | ||| |
Sbjct 553381 TGGGTTCTCTCATGTGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAG 553322
Query 70967 CAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAA 71026
| ||||| | | | || || | |||||||||| || || || | ||| |
Sbjct 553321 CGGCCATCTGGACAACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTA 553262
Query 71027 TATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAAT 71075
|||| | || ||| | | |||||||| || || || || ||||| ||
Sbjct 553261 TATCGGCAGGGRTGTTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGAT 553210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671132950016200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |