Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq334 251 1e-61 seq434 129 9e-25 >seq334 Length=652976 Score = 251 bits (278), Expect = 1e-61 Identities = 576/857 (67%), Gaps = 19/857 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||| | || ||||| ||||| | || ||| | ||||| Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCTC 128427 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | || | | || |||| || || || Sbjct 128428 TCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGATGATGAGAAGTTCTTCATCTCC 128487 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | ||||| || |||| ||||| || || |||||||| || || || || || Sbjct 128488 CACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAG-CG 128546 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGAT 125257 ||||||| ||| | ||||| |||| | ||||| ||||| ||||| |||||||| Sbjct 128547 ATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGAT 128606 Query 125258 TGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-GC 125316 |||||| | ||||| || | |||||| || ||||||| ||||| || || || Sbjct 128607 GGAGAACATCCACTCCGAGACCTACTCTCTCCTCATTGACACATACATCAAGGAGCCCGC 128666 Query 125317 AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTC 125376 | | || ||| ||||| ||||| |||||||| | || | || || | ||||| Sbjct 128667 CCAGAAGACCCAT-CTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGGCGG 128725 Query 125377 AATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCAT 125436 | |||| | | ||||||| |||| | ||||| | | |||| | | || | || | Sbjct 128726 ACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCCACCTTCGCCCAGCGTTTGATCGCCT 128785 Query 125437 TCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGA 125496 | |||||||| |||||||||||||| ||| || || ||||||| |||||||||| Sbjct 128786 TTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGA 128845 Query 125497 AGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCC 125556 |||| || ||||||||||| ||||| | ||||||| | || || || |||||||| | Sbjct 128846 AGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGAGGGTC 128905 Query 125557 TACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCCGAGTGCAGAT 125613 | ||| ||||| ||| |||||||| ||||| || | || |||| ||| Sbjct 128906 TCCACACCGACTTCGCCTGCCTACTGTTCTCGCACCTCAACAACCGCCCCG---GCA--- 128959 Query 125614 CCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTC 125673 || |||| ||| || || | || |||||||| || || || || || Sbjct 128960 --AG-GATG---TCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCT 129013 Query 125674 TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 | || || | || || | | | | ||||||||| ||| || ||| |||||| Sbjct 129014 TGACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCAGTACA 129073 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCA 125793 | ||||| || || || |||||| || || | | | ||| | ||| ||||| Sbjct 129074 TCGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGTGTACCGCGCCA 129133 Query 125794 AGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGA 125853 || ||||| || |||||| | ||| || || | || ||||||||||| ||||||| Sbjct 129134 CAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 129193 Query 125854 AGAAGGTCAGCGAGTAC 125870 || ||| |||| ||| Sbjct 129194 AGCGCGTCGGCGACTAC 129210 >seq434 Length=564148 Score = 129 bits (142), Expect = 9e-25 Identities = 322/484 (67%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 96865 GATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTT 96924 ||||||| ||||| ||||| || | || || ||| | ||| |||| | || |||| Sbjct 552083 GATACGTAGACCAGGGTGGCAACAAGAGACCTGGTGCTTTTGCCATCTATCTCGAGCCTT 552142 Query 96925 GGCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCAC 96984 ||||| |||| ||||| || || | || | || || ||| ||| ||||| | | Sbjct 552143 GGCACTCGGATGTTTTCGAGTTCCTGGACCTTCGAAAGAACCACGGCAAGGAAGAAGTCC 552202 Query 96985 GAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG 97044 | ||| | || | || || || ||| | || || | ||||||||||| ||| | Sbjct 552203 GTGCCCGTGATCTTTTCCTGGCTCTTTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGA 552262 Query 97045 ACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGG 97104 | |||| | |||| ||| ||||||||| || | || || || ||||| || | Sbjct 552263 AGAATGGCGAGTGGACCCTCATGTGCCCCAACGAATGCCCTGGCCTAGCCGATGTCTATG 552322 Query 97105 GCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGA 97163 |||| |||||||||||| |||| | ||||| |||||| || || ||| || Sbjct 552323 GCGACGAGTTTGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGTGGCCGCCAGAAGA 552382 Query 97164 GTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222 | | || | |||| |||||| | ||||| | |||||| |||||||||| || Sbjct 552383 -TTAAGGCTC-AGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACTGAGACTGGAAACCC 552440 Query 97223 GTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCAT 97282 | ||| || ||||||||| | || ||||| |||||||| || | || || || Sbjct 552441 CTTCATGCTTTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACTAT 552500 Query 97283 CAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGT 97342 |||| || || ||||| || || | |||||| | | || |||||| ||| || Sbjct 552501 TCGCAGCTCGAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCTGACGAGGTGGCTGT 552560 Query 97343 TTGC 97346 |||| Sbjct 552561 TTGC 552564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741052298886200