Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq698 129 1e-24
seq737 114 3e-20
>seq698
Length=460427
Score = 129 bits (142), Expect = 1e-24
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||| ||||| | |||||| || || || ||||||
Sbjct 204002 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCA 203943
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | |||||||||||||| || ||||| || ||||||||| ||||| ||
Sbjct 203942 GCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATC-TTGCTCTT 203884
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| ||| || ||| || || || ||||| ||||| || || | |||
Sbjct 203883 CACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGT 203824
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 203823 CTTGACAAAGATTTGCAT 203806
Score = 104 bits (114), Expect = 5e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || ||||| ||||| |||| || || || || || || ||
Sbjct 203546 GTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCG 203487
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| || |||||||| || || || || ||||||||||| | ||
Sbjct 203486 GCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTG 203427
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| | || ||||| | || || ||||| || ||||| ||
Sbjct 203426 ACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTC 203367
Query 104543 TTTACAA 104549
|||||||
Sbjct 203366 TTTACAA 203360
>seq737
Length=337091
Score = 114 bits (126), Expect = 3e-20
Identities = 148/202 (73%), Gaps = 3/202 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || ||||||| ||||| || ||||| || ||
Sbjct 284558 GTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCG 284617
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||| || || || || || || || |||||||| || | ||
Sbjct 284618 GCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTGGACTTG 284677
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||| ||| || || ||||| || || ||||||||||| ||||| ||
Sbjct 284678 ACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTAAGGGTC 284737
Query 104543 TTTACAAA--TATCTGCATTTT 104562
|| || || ||| || |||||
Sbjct 284738 TTCACGAAGCTAT-TGAATTTT 284758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151387409542460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |