Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq32 105 6e-18 >seq32 Length=575693 Score = 105 bits (116), Expect = 6e-18 Identities = 130/176 (74%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCC--CGTCTTTACCTCGAAATCGTTGTGG 5638 ||||||| ||| ||||| || || |||||||| || | || ||| ||| || | Sbjct 310087 GCGCTCGACGATGAGCTGGGCGATGCGGTCGCCGACGGCG--ACGGGGAAGTCGGCGTCG 310144 Query 5639 CCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCG 5698 || ||||||||||| || | | |||||||||||||||||| || ||||| ||| Sbjct 310145 GCGTGGTTGAACAGCAGGACCTTGAGGGGGCCGCGGTAGTCGGCGTCGATGACGCCGGCG 310204 Query 5699 CCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTA 5754 ||| ||||||||||||||| |||||| || || || || ||||| || ||||| Sbjct 310205 CCCGTGTCGATGAAGTGCTTCGACGCCAGCCCCGACCGCGGCGCCACCCGCCCGTA 310260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430050495240440