Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq698 82.4 6e-11 >seq698 Length=460427 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582 || || ||||||||||| || |||||||| || | | | || || |||| || || || Sbjct 203263 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTG-CGACCGTCTTCAAGTTG 203205 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| ||| || |||| || ||||| || || || | | ||||||||| || || Sbjct 203204 CTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 203145 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | ||| | | | || |||||||| | || || ||| | || ||||| || ||| Sbjct 203144 CGACTTAACGTTGTCG--ATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCG 203087 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTC 48732 ||||| || || || || ||||||||| |||| Sbjct 203086 GTGAGGGTCTTGACGAAGATCTGCATCTTGTC 203055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247375170745