Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq423 105 1e-18 seq113 95.1 2e-15 >seq423 Length=559669 Score = 105 bits (116), Expect = 1e-18 Identities = 85/100 (85%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || |||||||| || ||||||||||| |||| Sbjct 512314 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 512256 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||| ||||| || ||||||||||| ||||||||| |||| Sbjct 512255 TCCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 512216 >seq113 Length=335573 Score = 95.1 bits (104), Expect = 2e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| || | |||| | ||| ||||||| || || |||| ||||| Sbjct 13711 TGATCTACGAAGAGACCCGAGGTGTTCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGATG 13770 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 || | ||| ||||||||||| || || ||||| ||||| || | || ||||||| | Sbjct 13771 CTGTTACCTACACCGAGCACGCCAAGCGCAAGACCGTCACTTCTCTCGACGTCGTCTACG 13830 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | ||||| || || ||||| | | || ||||| || ||||| || Sbjct 13831 CCTTGAAGCGACAGGGCCGCACCCTGTACGGTTTCGGTGGTTAAGCT 13877 Score = 91.5 bits (100), Expect = 2e-14 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||| || || Sbjct 13554 GCCAAGCGCCACCGTAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 13612 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 || ||||| |||||||||||||| ||||||||| Sbjct 13613 TCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 13646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074518841285