Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq434 212 8e-50 seq334 107 2e-18 >seq434 Length=564148 Score = 212 bits (234), Expect = 8e-50 Identities = 746/1154 (65%), Gaps = 22/1154 (2%) Strand=Plus/Minus Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947 ||| |||| || |||| || ||||| || ||||| | || | | || | || || Sbjct 552585 CAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGAT 552526 Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007 ||||||||| || || | ||||| || | || | || || ||||| ||| Sbjct 552525 CTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTT 552466 Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067 || |||||| ||||| ||||| || | ||||| ||| |||||| ||| | ||| || Sbjct 552465 GCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGC 552406 Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTG 63126 | ||| | | || ||||||| || | | | | ||| |||||| Sbjct 552405 ATACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGCTTCGTACTTCT 552347 Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186 |||| || |||||||| || | |||| | | | ||||| ||||| | || | Sbjct 552346 CGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGC 552287 Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246 |||| | | |||||| || | | || || || ||||| ||||| || |||||||||| Sbjct 552286 ACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAA 552227 Query 63247 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306 |||| | || ||||| | || | ||| || || || |||||| ||| || | Sbjct 552226 GAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCA 552167 Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366 ||||| | | || ||| || ||||| || || | || ||||| | | | ||||| | | Sbjct 552166 GGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCT 552107 Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426 |||| || ||||| |||| ||||||||| |||||||| | || | | ||| || | || Sbjct 552106 TGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAA 552047 Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA 63486 ||||||| || | || || || |||| || || || | || ||||| | Sbjct 552046 TACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGA 551987 Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCA 63545 | ||||| || || || ||||| || ||||| | ||||| || |||| ||||| Sbjct 551986 TGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCG 551928 Query 63546 TAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63605 ||||||||||| ||||| || || |||||| || || || ||| || | | ||| Sbjct 551927 TAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA 551871 Query 63606 CGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63661 | || ||||| ||||| || | || || || || || || || |||| || Sbjct 551870 -GCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGA 551812 Query 63662 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTG 63717 | || || || |||| ||| | || | ||| || |||| || || | Sbjct 551811 CATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAG 551756 Query 63718 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 63777 | |||||||| | ||||||||| ||||| || |||||||| | || | || | || | Sbjct 551755 CCACACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGAT 551696 Query 63778 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63837 | ||| |||||||| || || || || || | ||| ||||||| || || | || Sbjct 551695 ATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAA 551636 Query 63838 TAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATA 63896 | | |||| | | ||||| | | | | || | | | | | | ||| || || Sbjct 551635 TGGCAGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATC 551577 Query 63897 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 63956 || ||||| | || | || || || || ||||||| | | | ||| || || || Sbjct 551576 ATAGGAGATGGCTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCA 551517 Query 63957 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 64016 | | || || || | ||||||||| ||||| ||||| || | || || || ||| Sbjct 551516 GACCACTGCTTCTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATG 551457 Query 64017 GCATAATCCGGATG 64030 ||||| || || || Sbjct 551456 GCATAGTCTGGGTG 551443 >seq334 Length=652976 Score = 107 bits (118), Expect = 2e-18 Identities = 281/428 (66%), Gaps = 3/428 (1%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || ||||| ||| ||| ||||||||||| | || || ||||| || || || || Sbjct 128924 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGG 128865 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 |||||||| || |||||||| || ||||| || ||||| ||||| | || |||||| Sbjct 128864 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAG 128805 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480 || || || || || |||||||| || | | || | | || ||||| Sbjct 128804 ATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCG 128745 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 ||||| | | ||||| || |||||| | | ||||| || || || ||||| || Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTG 128685 Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600 ||||||| | | || | || || | || || || || | ||| || | Sbjct 128684 AAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTC 128625 Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660 || || || ||||| || || ||||| || |||||||| |||| ||||||| |||| Sbjct 128624 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATC 128565 Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720 || || || | | ||||| || | | || || || || || ||||| || || Sbjct 128564 TGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 128505 Query 33721 AAAAACGC 33728 ||||| || Sbjct 128504 AAAAAGGC 128497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622941398804200