Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq434 212 8e-50
seq334 107 2e-18
>seq434
Length=564148
Score = 212 bits (234), Expect = 8e-50
Identities = 746/1154 (65%), Gaps = 22/1154 (2%)
Strand=Plus/Minus
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
||| |||| || |||| || ||||| || ||||| | || | | || | || ||
Sbjct 552585 CAACGCAAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGAT 552526
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||||||||| || || | ||||| || | || | || || ||||| |||
Sbjct 552525 CTCAGTGCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTT 552466
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||| ||||| ||||| || | ||||| ||| |||||| ||| | ||| ||
Sbjct 552465 GCAGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGC 552406
Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGTG 63126
| ||| | | || ||||||| || | | | | ||| ||||||
Sbjct 552405 ATACCACA-GCTTCTGAGCCTTAATCTTCTGGCGGCCACGACCCTCTGCTTCGTACTTCT 552347
Query 63127 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGAC 63186
|||| || |||||||| || | |||| | | | ||||| ||||| | || |
Sbjct 552346 CGTACAGGGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGC 552287
Query 63187 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63246
|||| | | |||||| || | | || || || ||||| ||||| || ||||||||||
Sbjct 552286 ACATGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAA 552227
Query 63247 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63306
|||| | || ||||| | || | ||| || || || |||||| ||| || |
Sbjct 552226 GAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCA 552167
Query 63307 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63366
||||| | | || ||| || ||||| || || | || ||||| | | | ||||| | |
Sbjct 552166 GGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCT 552107
Query 63367 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63426
|||| || ||||| |||| ||||||||| |||||||| | || | | ||| || | ||
Sbjct 552106 TGTTGCCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAA 552047
Query 63427 TACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAA 63486
||||||| || | || || || |||| || || || | || ||||| |
Sbjct 552046 TACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGA 551987
Query 63487 TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTCA 63545
| ||||| || || || ||||| || ||||| | ||||| || |||| |||||
Sbjct 551986 TGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCG 551928
Query 63546 TAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 63605
||||||||||| ||||| || || |||||| || || || ||| || | | |||
Sbjct 551927 TAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA 551871
Query 63606 CGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63661
| || ||||| ||||| || | || || || || || || || |||| ||
Sbjct 551870 -GCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGA 551812
Query 63662 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTG 63717
| || || || |||| ||| | || | ||| || |||| || || |
Sbjct 551811 CATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAG 551756
Query 63718 CGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGT 63777
| |||||||| | ||||||||| ||||| || |||||||| | || | || | || |
Sbjct 551755 CCACACGCATGATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGAT 551696
Query 63778 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 63837
| ||| |||||||| || || || || || | ||| ||||||| || || | ||
Sbjct 551695 ATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAA 551636
Query 63838 TAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT-GAAATA 63896
| | |||| | | ||||| | | | | || | | | | | | ||| || ||
Sbjct 551635 TGGCAGAGTCAAAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATC 551577
Query 63897 ATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCA 63956
|| ||||| | || | || || || || ||||||| | | | ||| || || ||
Sbjct 551576 ATAGGAGATGGCTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCA 551517
Query 63957 CTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATG 64016
| | || || || | ||||||||| ||||| ||||| || | || || || |||
Sbjct 551516 GACCACTGCTTCTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATG 551457
Query 64017 GCATAATCCGGATG 64030
||||| || || ||
Sbjct 551456 GCATAGTCTGGGTG 551443
>seq334
Length=652976
Score = 107 bits (118), Expect = 2e-18
Identities = 281/428 (66%), Gaps = 3/428 (1%)
Strand=Plus/Minus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| ||| ||| ||||||||||| | || || ||||| || || || ||
Sbjct 128924 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGG 128865
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|||||||| || |||||||| || ||||| || ||||| ||||| | || ||||||
Sbjct 128864 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAG 128805
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33480
|| || || || || |||||||| || | | || | | || |||||
Sbjct 128804 ATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGCG 128745
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
||||| | | ||||| || |||||| | | ||||| || || || ||||| ||
Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTG 128685
Query 33541 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 33600
||||||| | | || | || || | || || || || | ||| || |
Sbjct 128684 AAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTC 128625
Query 33601 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 33660
|| || || ||||| || || ||||| || |||||||| |||| ||||||| ||||
Sbjct 128624 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATC 128565
Query 33661 TGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33720
|| || || | | ||||| || | | || || || || || ||||| || ||
Sbjct 128564 TGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCG 128505
Query 33721 AAAAACGC 33728
||||| ||
Sbjct 128504 AAAAAGGC 128497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622941398804200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |