Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq698 100 2e-16
seq737 84.2 2e-11
seq27 84.2 2e-11
>seq698
Length=460427
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 24001 TTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCG 24060
||||||| || | || ||||| | || ||| | || |||||| | |||||||||||
Sbjct 203360 TTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCG 203419
Query 24061 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGA 24120
| | ||||| |||||| ||||| || ||||| ||||| || || ||| || |||
Sbjct 203420 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGA 203479
Query 24121 TTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAG 24180
| | || ||||||||| || || |||| | ||| | | ||| || ||||| || || |
Sbjct 203480 TCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGG 203539
Query 24181 AATCTACAATTCA 24193
|||| || ||||
Sbjct 203540 AATCCACTCTTCA 203552
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || ||||| || || || | |||||| ||||||| || | |
Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | || || |||||| ||||| |||||||| ||||| ||||||
Sbjct 203866 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAA 203925
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
|| | || || | || || ||||| || || || | | | | ||||| || |||
Sbjct 203926 CAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAC 203985
Query 24171 ATTCAAAAAGAATCTAC 24187
|| || || || |||||
Sbjct 203986 ATCCAGAAGGAGTCTAC 204002
>seq737
Length=337091
Score = 84.2 bits (92), Expect = 2e-11
Identities = 140/201 (70%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 23988 AAAATGCAAGTGTTT-GTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046
||||| ||| | || || || || | || || || | || ||| |||| || ||| |
Sbjct 284758 AAAATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTC 284699
Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106
|||||||||||| | ||||| || ||| ||||| || ||||| || |||||
Sbjct 284698 TTCCGACACCATCGACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGA 284639
Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166
|||||| | ||||| | || ||||||||||||||| || | | ||| | ||| ||
Sbjct 284638 CCAACAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTA 284579
Query 24167 TAACATTCAAAAAGAATCTAC 24187
||||| || || || || ||
Sbjct 284578 CAACATCCAGAAGGAGTCCAC 284558
>seq27
Length=240170
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| | || || ||| | | |
Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| || || || || ||||| |||
Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| ||||||| | || ||||||||||||||| || | | | | || ||| || |||
Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212
Query 24171 ATTCAAAAAGA 24181
|| || || ||
Sbjct 62211 ATCCAGAAGGA 62201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429932096315475
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |