Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq334 140 3e-28 seq698 104 2e-17 >seq334 Length=652976 Score = 140 bits (154), Expect = 3e-28 Identities = 349/520 (67%), Gaps = 19/520 (4%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || || ||| | |||| ||| | |||||||| || | |||||| || | | Sbjct 128701 ATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCC 128760 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 || |||||| ||||| || | |||||||| || |||||| |||| || || Sbjct 128761 ACCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCC 128820 Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 || ||| ||||||| | |||| || | || | |||||||||||||||| || || Sbjct 128821 TTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTC-TCATGCCCGGCCTGACCTTCTCTAA 128879 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 |||||| || ||||| |||||||| || || || ||||| || || ||||| | | Sbjct 128880 CGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTG--CCTACTGT---TC 128934 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACA------CCGTGCTGAGCATGTTCAAGGAGGC 46376 |||| | | |||| | || |||| || ||| | || || ||| || || Sbjct 128935 TCGC-ACCTCAACAACC--GC-CCCGGCAAGGATGTCGTCCAGAAGATCATCACAGATGC 128990 Query 46377 GGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAA 46436 || ||||| ||| |||| || || |||| ||||||||| ||||| || |||||||| Sbjct 128991 CGTCGCCATCGAGCAGGAATTCTTGACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAA 129050 Query 46437 CGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCA 46496 ||| | ||| | ||||||||||| || || ||||| || | || | | || Sbjct 129051 CGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGGT-CGCCCTCG 129109 Query 46497 CCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGG 46555 | | |||| | | ||| || || || || || ||| | ||||||||||| | Sbjct 129110 GTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACATCTCCCTCG 129169 Query 46556 AGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||||| || || || ||||| |||||||||||||| || Sbjct 129170 GTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTA 129209 >seq698 Length=460427 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || || ||||| || |||||||| ||| Sbjct 203576 CCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAT 203517 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||| ||| |||| || ||||||||||| ||||| Sbjct 203516 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGA 203457 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 203456 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 203397 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||| | ||| || ||||| || || ||||| Sbjct 203396 TCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | |||||||||||| ||||||||||| |||||| Sbjct 203804 CCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTC 203745 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| | |||||| || || |||| | || || ||||| || ||| Sbjct 203744 AGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGG 203685 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || |||| | || | || || | ||||| | Sbjct 203684 ATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACC 203625 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || ||||| || ||||| Sbjct 203624 TCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008404380800