Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq698 89.7 4e-13 seq737 84.2 2e-11 >seq698 Length=460427 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/239 (69%), Gaps = 5/239 (2%) Strand=Plus/Minus Query 16701 GCATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGT 16757 |||||||| ||||| || || | || |||| || ||||| |||||||| || |||| Sbjct 204043 GCATTTACTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGT 203984 Query 16758 TGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTT 16817 |||||||| || || ||||||||| || || || || | || || || |||| Sbjct 203983 TGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTT 203924 Query 16818 GGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCG 16876 | || ||| | ||| || ||||| ||| ||||| |||||| | | | | |||||| Sbjct 203923 GATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATGGTGTCG 203865 Query 16877 CCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||| | ||| || || || || |||| || |||||||| || ||||| Sbjct 203864 GAAGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 87.8 bits (96), Expect = 1e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || ||||||||||||| | |||| | | ||||| | || Sbjct 203552 TGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGC 203493 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || | ||||| ||||| ||| | |||||| ||||| ||| | | Sbjct 203492 TTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTC 203433 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | |||||| | ||| |||| ||||||||| |||||||| Sbjct 203432 GACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTA 203373 Query 16913 AGCGTTTTGACAA 16925 || || || |||| Sbjct 203372 AGGGTCTTTACAA 203360 >seq737 Length=337091 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||||| | ||| | ||||||| | ||| Sbjct 284552 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGC 284611 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| || | || || ||||||||||| || | |||||| ||||| ||||| Sbjct 284612 TTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTG 284671 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | |||||| | |||| || | |||||| || || || || Sbjct 284672 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTA 284731 Query 16913 AGCGTTTTGACAAA 16926 || || || || || Sbjct 284732 AGGGTCTTCACGAA 284745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405084321927550