Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq698 89.7 4e-13
seq737 84.2 2e-11
>seq698
Length=460427
Score = 89.7 bits (98), Expect = 4e-13
Identities = 165/239 (69%), Gaps = 5/239 (2%)
Strand=Plus/Minus
Query 16701 GCATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGT 16757
|||||||| ||||| || || | || |||| || ||||| |||||||| || ||||
Sbjct 204043 GCATTTACTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGT 203984
Query 16758 TGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTT 16817
|||||||| || || ||||||||| || || || || | || || || ||||
Sbjct 203983 TGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTT 203924
Query 16818 GGTCCACAGGCACGCCCTCTTTGTCGGCAAT-TTGCTGCTTCACCTGGCCCACAGTGTCG 16876
| || ||| | ||| || ||||| ||| ||||| |||||| | | | | ||||||
Sbjct 203923 GATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCT-CTTCACGTTGTCGATGGTGTCG 203865
Query 16877 CCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
| || ||| | ||| || || || || |||| || |||||||| || |||||
Sbjct 203864 GAAGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||| ||||| || ||||||||||||| | |||| | | ||||| | ||
Sbjct 203552 TGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGC 203493
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || | ||||| ||||| ||| | |||||| ||||| ||| | |
Sbjct 203492 TTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTC 203433
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | |||||| | ||| |||| ||||||||| ||||||||
Sbjct 203432 GACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTA 203373
Query 16913 AGCGTTTTGACAA 16925
|| || || ||||
Sbjct 203372 AGGGTCTTTACAA 203360
>seq737
Length=337091
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||||||||||| | ||| | ||||||| | |||
Sbjct 284552 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGC 284611
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| || | || || ||||||||||| || | |||||| ||||| |||||
Sbjct 284612 TTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTG 284671
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
||| || | | | | |||||| | |||| || | |||||| || || || ||
Sbjct 284672 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTA 284731
Query 16913 AGCGTTTTGACAAA 16926
|| || || || ||
Sbjct 284732 AGGGTCTTCACGAA 284745
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405084321927550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |