Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq27 96.9 2e-15
seq698 89.7 3e-13
>seq27
Length=240170
Score = 96.9 bits (106), Expect = 2e-15
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| ||||||||||| || || ||||| || || | | || |||| || | |||
Sbjct 62189 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGC 62248
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| ||||| || || || || ||||| |||| ||||| || || |||||| || ||
Sbjct 62249 TTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTG 62308
Query 38235 TGCTTCACATTCTGGACAGTAT--CTCCACTTTCAACTTCTAATGTAATAGTTTTACCCG 38292
||| ||||| | || || | ||| || || || || | || ||||| || ||||
Sbjct 62309 GACTTGACATTGTCGATGGTGTCGCTCGAC--TCCACCTCAAGGGTGATAGTCTTGCCCG 62366
Query 38293 TCAAGGTTTTCACGAATATCTGCATGTTT 38321
| | ||| || ||||| ||||||||| ||
Sbjct 62367 TGAGGGTCTTGACGAAGATCTGCATGATT 62395
>seq698
Length=460427
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 38109 ACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCT 38168
||||| || || || |||||| || || ||||| || || | || |||| ||
Sbjct 204014 ACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCC 203955
Query 38169 AATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATA 38228
| || ||||| || || || || ||||||||||| | || | |||||| |||||| |
Sbjct 203954 AGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGA 203895
Query 38229 ATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTA 38288
|| || |||||| || | || || || | ||||||||| | ||||| || ||
Sbjct 203894 ATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTC 203835
Query 38289 CCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||| || || || || || |||||
Sbjct 203834 CCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 86.0 bits (94), Expect = 4e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || ||| | || | || |||||||||||||| || || ||||| || ||
Sbjct 203287 CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 203228
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| | || |||| || | ||| |||||||| || || | || ||||| || | ||||
Sbjct 203227 AGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGG 203168
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| ||| || |||||| || || ||| || || | || ||||| ||| ||
Sbjct 203167 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACC 203108
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | || || || || || || | ||| || ||||| |||||||| ||
Sbjct 203107 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCTT 203058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334944158784095
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |