Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq434 199 5e-46
>seq434
Length=564148
Score = 199 bits (220), Expect = 5e-46
Identities = 591/903 (65%), Gaps = 20/903 (2%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| |||||||| || | |||| | | || ||||| ||||| | || ||||| | | |
Sbjct 552335 TCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGTC 552276
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
||||| || | | || || || ||||| ||||| || |||||||||||||| | ||
Sbjct 552275 CACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA 552216
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
||||| | || | ||| || || || |||||| ||| || |||||| | | |
Sbjct 552215 AGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232
| ||| || ||||| || || | || ||||| | | | ||||| | ||||| || |||
Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCC 552096
Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292
|| |||| ||||||||| |||||||| | || | | ||| || | |||||| || ||
Sbjct 552095 TGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAG 552036
Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352
|| || || || || | || || || | || ||||| || |||||
Sbjct 552035 GTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCA 551976
Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTC 63411
|| || || ||||| || ||||| | ||||| || |||| || || ||||| |||||
Sbjct 551975 ATACCACCGGCCATCTTGGAGATCATGGCGCA-GGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AG 63467
|| || || ||| |||||| || || || ||| || | | ||| | || |
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGA---GCTGA-GCCTGGGGTG 551861
Query 63468 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGT 63527
|||| ||||| || | || || || || || || || |||| || | || || |
Sbjct 551860 TTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTAT 551801
Query 63528 ACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATT 63583
| |||| ||| | || | ||| || |||| || || || ||||||||
Sbjct 551800 AGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG----CCGACAGCCACACGCATG 551745
Query 63584 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63643
| ||||||||| ||||| || |||||||| | || | || | || || ||| |||
Sbjct 551744 ATCATGTGCTGCGGTCTCTCGACGATCTTATCGTCAAGCTTGAGCAGATATGATCGCTCC 551685
Query 63644 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63703
||||| || || || || || | ||| ||||||| || || | ||| | ||||
Sbjct 551684 AAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTCTGTCATAGACAATGGCAGAGTCA 551625
Query 63704 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATACTT-GAAATAATAGGAAAATG 63762
| | ||||| | | | | || ||| | | | | ||| || || |||||| | |
Sbjct 551624 AAGTCCTCCTTGTGTCTCATGAC-ACACTCGTAGGTCTCCTTAGAGATCATAGGAGATGG 551566
Query 63763 TTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63822
|| | || || || |||||||||| | | | ||| || || || | | ||
Sbjct 551565 CTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCACTGATGACAGCAGACCACTGCTT 551506
Query 63823 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 63882
|| || | |||||||| ||||| ||||| || | || || || |||||||| || ||
Sbjct 551505 CTTGGTCTGCTTGTGTAGGTTTGACACGGCAATACGTGCAGCGAGGATGGCATAGTCTGG 551446
Query 63883 ATG 63885
||
Sbjct 551445 GTG 551443
Score = 89.7 bits (98), Expect = 7e-13
Identities = 340/531 (64%), Gaps = 5/531 (1%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||| || || ||||||| |||| || ||||| || |||||||| || || || ||
Sbjct 553487 GTGAACTGGATAGGAGCGGCAGCGGCTTGTGTACGAAGGTAGTACATGCCAGTCTTCAGT 553428
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
||||| |||| || |||||||||||| || | ||| | | || ||| ||
Sbjct 553427 CCGAGCTTCCAACCAGTAAAATGCATACTGGTAATCTTGCCCATAGTGGGTTCTCTCATG 553368
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
||||| |||| ||||| || || ||||| || || | ||| || ||||| | | |
Sbjct 553367 TGGATGTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCATCTGGACA 553308
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
| || || | |||||||||| || || || | ||| ||||| | || |
Sbjct 553307 ACAGTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGGCAGGGRTG 553248
Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
|| | | |||||||| || || || || || || || | ||||| || |||| |
Sbjct 553247 TTAGGAATGTTCTGAATCGAACCGCCCTCAGCAATGATACGGTTCTTCATGCTATCAGAC 553188
Query 62147 CATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCA 62206
|| | | || | | | | || | || || || || || ||||| |||
Sbjct 553187 CAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGGGTTGACAACCTGGAATTCGCCA 553128
Query 62207 GACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCC 62266
| | || | || | || ||||| ||| || || || | | ||||| || |||
Sbjct 553127 GCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACCC 553068
Query 62267 AAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACC- 62325
| || || | ||| || || ||||| || || ||||| || || || | | |||
Sbjct 553067 AGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACCA 553008
Query 62326 GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG 62376
|| || | | ||||| || ||||| | ||| | ||| |||||||||||
Sbjct 553007 GTTTGCT-TAATTTTCTCCTTTAGGCTTGTCCAGTCCCAGAGATCCGACGG 552958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633626099302000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |