Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq698 102 7e-17 seq737 91.5 1e-13 >seq698 Length=460427 Score = 102 bits (112), Expect = 7e-17 Identities = 148/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || |||||| | || || || | ||||| | || |||||||| || Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || | || ||| ||||| || || || || || || Sbjct 203638 GACACGATCGACAACGTCA---AATC-CAAGATCCAGGACAAGGAGGGAATCCCGCCCGA 203693 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || |||| |||||||| || || || || |||| || || || |||| || Sbjct 203694 CCAACAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTA 203753 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| ||||| || || || || || || Sbjct 203754 CAACATTCAGAAGGAGTCGACCCTGCA 203780 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || ||||||| | || || || || || Sbjct 203061 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 203120 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || ||||| | ||| || ||| ||||| || || || || ||||||||| Sbjct 203121 GATACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAA 203180 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| ||||| || ||| | ||||| | ||||||| | ||| ||||| Sbjct 203181 CAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTACAAC 203240 Query 25179 ATTCAAAAAGA 25189 || || || || Sbjct 203241 ATCCAGAAGGA 203251 >seq737 Length=337091 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| | || ||||| | ||||| |||| |||||||| || ||||| ||| Sbjct 284745 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 284686 Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124 || || || ||| | |||| ||| ||||| || || || || || ||||||||||| Sbjct 284685 GA--CAATGTCAAGTCCAAAATTCAG-GACAAGGAGGGCATCCCCCCCGACCAACAGCGT 284629 Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184 | || || |||||||| ||| | || || | || ||| | ||| ||||| || || Sbjct 284628 CTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTACAACATCCAG 284569 Query 25185 AAAGAATCCACGCTACA 25201 || || ||||| || || Sbjct 284568 AAGGAGTCCACTCTCCA 284552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324065517175