Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq698 102 7e-17
seq737 91.5 1e-13
>seq698
Length=460427
Score = 102 bits (112), Expect = 7e-17
Identities = 148/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||||||||| || |||||| | || || || | ||||| | || |||||||| ||
Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| ||||| |||| || | || ||| ||||| || || || || || ||
Sbjct 203638 GACACGATCGACAACGTCA---AATC-CAAGATCCAGGACAAGGAGGGAATCCCGCCCGA 203693
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
|||||| || |||| |||||||| || || || || |||| || || || |||| ||
Sbjct 203694 CCAACAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTA 203753
Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201
||| ||||| || || || || || ||
Sbjct 203754 CAACATTCAGAAGGAGTCGACCCTGCA 203780
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | ||||| || ||||||| | || || || || ||
Sbjct 203061 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCCTCG 203120
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| | ||| || ||| ||||| || || || || |||||||||
Sbjct 203121 GATACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAA 203180
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | ||||| ||||| || ||| | ||||| | ||||||| | ||| |||||
Sbjct 203181 CAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTACAAC 203240
Query 25179 ATTCAAAAAGA 25189
|| || || ||
Sbjct 203241 ATCCAGAAGGA 203251
>seq737
Length=337091
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/197 (72%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| | || ||||| | ||||| |||| |||||||| || ||||| |||
Sbjct 284745 TTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATC 284686
Query 25068 GAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGG 25124
|| || || ||| | |||| ||| ||||| || || || || || |||||||||||
Sbjct 284685 GA--CAATGTCAAGTCCAAAATTCAG-GACAAGGAGGGCATCCCCCCCGACCAACAGCGT 284629
Query 25125 ATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAA 25184
| || || |||||||| ||| | || || | || ||| | ||| ||||| || ||
Sbjct 284628 CTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTACAACATCCAG 284569
Query 25185 AAAGAATCCACGCTACA 25201
|| || ||||| || ||
Sbjct 284568 AAGGAGTCCACTCTCCA 284552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433324065517175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |