Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq334 145 8e-30 >seq334 Length=652976 Score = 145 bits (160), Expect = 8e-30 Identities = 383/576 (66%), Gaps = 13/576 (2%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143 ||| || ||| || |||||||| || | ||| ||||| || || || | ||| || || Sbjct 128932 ACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGA 128873 Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203 | || | || || | || || || ||||||||||| || || || || || ||| Sbjct 128872 AGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGC 128813 Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263 || || || || || ||||| ||||| || | | ||| | ||| || | ||| | Sbjct 128812 TGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGT---GGACT 128756 Query 93264 TACTGCT---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 | || |||||| | | ||||| || || || | || ||||| | || | Sbjct 128755 TCTTGTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGT 128696 Query 93321 CGATAGCGTTAAATAGGTAA-TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 |||| ||||| || || | ||| || | | | || |||||||| || || | Sbjct 128695 CGATGGCGTTGAAGAGATGGGTCTT-CTGGGCGGGCTCCTTGATGTATGTGTCAATGAGG 128637 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 ||||| || | || || |||| |||||||| || ||||| |||||||| |||| Sbjct 128636 AGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGC 128577 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 || || | ||||| || || ||| |||| ||| || || || || ||||| || || Sbjct 128576 GCCTCGGGAATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCG 128517 Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAG 93558 |||||||| || ||||| || | || || || || ||||||||||| |||| | Sbjct 128516 TCGGATGCGGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGG 128457 Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 | || ||| ||| ||||| || || ||||| | || || | ||||| || || Sbjct 128456 CGGTTGCTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAA 128397 Query 93617 GCTTC-TGCTTTTTTGTACATATCCCATATGTCTTG 93651 ||||| ||| || |||||||| | ||| || | ||| Sbjct 128396 GCTTCGTGC-TTCTTGTACATCTGCCAGATCTGTTG 128362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556855614233800