Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq334 145 8e-30
>seq334
Length=652976
Score = 145 bits (160), Expect = 8e-30
Identities = 383/576 (66%), Gaps = 13/576 (2%)
Strand=Plus/Minus
Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGA 93143
||| || ||| || |||||||| || | ||| ||||| || || || | ||| || ||
Sbjct 128932 ACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGA 128873
Query 93144 ATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAG 93203
| || | || || | || || || ||||||||||| || || || || || |||
Sbjct 128872 AGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGC 128813
Query 93204 aaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT 93263
|| || || || || ||||| ||||| || | | ||| | ||| || | ||| |
Sbjct 128812 TGAAGAAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGT---GGACT 128756
Query 93264 TACTGCT---GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320
| || |||||| | | ||||| || || || | || ||||| | || |
Sbjct 128755 TCTTGTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGT 128696
Query 93321 CGATAGCGTTAAATAGGTAA-TCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379
|||| ||||| || || | ||| || | | | || |||||||| || || |
Sbjct 128695 CGATGGCGTTGAAGAGATGGGTCTT-CTGGGCGGGCTCCTTGATGTATGTGTCAATGAGG 128637
Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439
||||| || | || || |||| |||||||| || ||||| |||||||| ||||
Sbjct 128636 AGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGC 128577
Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499
|| || | ||||| || || ||| |||| ||| || || || || ||||| || ||
Sbjct 128576 GCCTCGGGAATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCG 128517
Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAG 93558
|||||||| || ||||| || | || || || || ||||||||||| |||| |
Sbjct 128516 TCGGATGCGGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGG 128457
Query 93559 C--TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616
| || ||| ||| ||||| || || ||||| | || || | ||||| || ||
Sbjct 128456 CGGTTGCTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAA 128397
Query 93617 GCTTC-TGCTTTTTTGTACATATCCCATATGTCTTG 93651
||||| ||| || |||||||| | ||| || | |||
Sbjct 128396 GCTTCGTGC-TTCTTGTACATCTGCCAGATCTGTTG 128362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556855614233800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |