Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq698 127 2e-24
seq737 109 5e-19
seq27 105 6e-18
>seq698
Length=460427
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | || || || || |||| ||||| ||||| | |
Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | ||| | ||||| || || || ||||||||||| || || ||||| |||
Sbjct 203638 GACACGATCGACAACGTCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCAA 203697
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||| ||||| |||||||| || ||||| |||||| ||| || | ||| ||||||
Sbjct 203698 CAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAAC 203757
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || ||| | || | ||| | ||| | ||||| |||
Sbjct 203758 ATTCAGAAGGAGTCGACCCTGCACCTTGTTCTCCGACTTCGCGGTGGT 203805
Score = 104 bits (114), Expect = 2e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
|||| || || | ||||| || || |||| | || || || | |||| ||| | |
Sbjct 203360 TTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACACCATCG 203419
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
|| || |||| || ||||| ||||||||||| ||||| || || || || || | |
Sbjct 203420 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGATTGA 203479
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| || |||||||| ||| | |||||| ||| ||| | ||||| |||||||| || || |
Sbjct 203480 TCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCCAGAAGG 203539
Query 22409 AATCCAC 22415
|||||||
Sbjct 203540 AATCCAC 203546
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || || || || || || | || || ||||| ||| | ||
Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | | || || ||||| |||||||| || ||||| || ||||||
Sbjct 203866 GACACCATCGACAACGTGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCAA 203925
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || || || || ||| | ||||| ||||| | ||| ||||||
Sbjct 203926 CAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACAAC 203985
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|| || || || || || | || || ||| | || | || |||||
Sbjct 203986 ATCCAGAAGGAGTCTACGCTCCACTTGGTTCTCCGTCTCCGTGGAGG 204032
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || || || | ||||| || || |||||||||| || ||| ||
Sbjct 203058 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCC 203117
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| |||||| | ||| | | || || || || ||||||||||| || || || ||
Sbjct 203118 TCGGATACCATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGAC 203177
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
||||| || | || || ||||| || || | || || ||||| | ||||| |||
Sbjct 203178 CAACAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTAC 203237
Query 22396 AACATTCAAAAAGA 22409
||||| || || ||
Sbjct 203238 AACATCCAGAAGGA 203251
>seq737
Length=337091
Score = 109 bits (120), Expect = 5e-19
Identities = 128/173 (74%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| ||||| || |||| || || ||||| | |||| ||| | ||| || ||||
Sbjct 284730 ACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGACACCATCGACAATGTCAAGTCC 284671
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|||||||| ||||||||||| || || ||||| ||||| ||||| || || ||||||||
Sbjct 284670 AAAATTCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGTCTGATCTTCGCCGGCAAG 284611
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | ||||| ||| || | ||||| |||||||| || || || |||||
Sbjct 284610 CAACTCGAGGACGGCCGAACTCTTTCCGACTACAACATCCAGAAGGAGTCCAC 284558
>seq27
Length=240170
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| ||||| | | |
Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || |||| || || || ||||||||||| || || ||||| |||
Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || |||||||| || | ||||| |||||| ||||||| ||||||
Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 62211 ATCCAGAAGGA 62201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419724189000925
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |