Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq334 95.1 2e-14
seq28 86.0 1e-11
>seq334
Length=652976
Score = 95.1 bits (104), Expect = 2e-14
Identities = 242/367 (66%), Gaps = 10/367 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| |||||||||||||||||||||||||
Sbjct 129191 TCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTG 129132
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| |||| ||| | || || || || || | ||||| || || ||||| |
Sbjct 129131 GCGCGGTACACCTTCTCGTTACCGAGGGCGACCAATAGACGGTCGGCGACGAACTCGATG 129072
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | | ||||||||| | | || || | |||||| | |
Sbjct 129071 TACTGCTTCATGAGGTTGGCGTTCATGCCGAGTAGGGCGCAGGGCAGTGCCTCCGTCAAG 129012
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAA-----TTGCCTTCACCTGTGCCAGAG 251797
||||||| ||| |||| || || || | | | | | || | |||| | |
Sbjct 129011 AATTCCTGCTCGATGGCGACGGCATCTGTGATGATCTTCTGGACGACATCCTTGCCGGGG 128952
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
| ||||| || | ||| |||| || | | || | ||| ||||||||||
Sbjct 128951 --CGGTTGTT---GAGGTGCGAGAACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGT 128897
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| || ||||| |||||| || | |||||| ||||| | ||||| ||| ||||||
Sbjct 128896 CACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCC 128837
Query 251918 AGAAGAT 251924
|||||||
Sbjct 128836 AGAAGAT 128830
>seq28
Length=286031
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||||||||||| ||||||||||| ||||||||||||| ||| | |||||||| |
Sbjct 275270 GCCCGGTTAGCTCAATCGGTAGAGCGTGAGACTCTTAATCTCAAGGTTGCGGGTTCGACC 275211
Query 142564 CCCACATCGGGC 142575
||| ||||||||
Sbjct 275210 CCCGCATCGGGC 275199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027826988976545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |