Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq334 185 2e-41 seq698 167 4e-36 seq27 167 4e-36 seq737 145 1e-29 >seq334 Length=652976 Score = 185 bits (204), Expect = 2e-41 Identities = 569/868 (66%), Gaps = 29/868 (3%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 129228 CATGACACCGGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACC 129169 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 |||||| ||| |||||||||||| |||||||| ||||| || ||| || ||| Sbjct 129168 GAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACC 129109 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || || | ||||| || ||||||||||||||||| |||| |||| | ||| Sbjct 129108 GAGGGCGACCAATAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 129049 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | |||||| | || || | ||| |||| ||| ||||||| || Sbjct 129048 CATGCCGAGTAGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGC 128989 Query 10175 TTCCTCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || ||| ||| || || || ||| | | ||||| ||| | ||| Sbjct 128988 ATCTGTGATGATCTTCTGGACGACATCCTTGCCGGGGC-GGTTGTT---GAGGTGCGAGA 128933 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 |||| || | || | |||||| |||||||| || ||||| |||||| || | Sbjct 128932 ACAGTAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGA 128873 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| ||||||||||| || || || |||||||| |||| | ||| | ||| Sbjct 128872 AGGTCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGC 128813 Query 10351 AGAACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAG----- 10403 || |||||| ||||| ||| | |||||| | |||| ||||||| | Sbjct 128812 TGA--AGAAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTT 128755 Query 10404 -CGGTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGT 10462 ||| ||| | | | | |||||| | |||||| | | | | |||||| || Sbjct 128754 CTTGTC-AGCG--ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGT 128698 Query 10463 CTCGATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAG 10522 ||||| || | |||||| | | | || || |||| || | |||| ||| Sbjct 128697 GTCGATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAG 128638 Query 10523 CAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA-CATAC 10581 || ||||| |||| ||||| | |||| | |||| || ||||||| ||| | Sbjct 128637 GAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAT-C 128579 Query 10582 GTGCCGAGGGGTCCGTGACTTCCTCGGCAAAG--TTG-TTGTTCAGGTTCTCCATCACCA 10638 | ||| ||| | || ||||| || || | | | | |||||||| | || | Sbjct 128578 GCGCCTCGGGAATCTGGA---CCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAA 128522 Query 10639 TGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGT 10698 |||| ||| | || || ||| | |||||||| ||||||| ||||||||||| Sbjct 128521 TGCCGTCGGATGCGGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGT 128462 Query 10699 TCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGA 10758 | || | | |||||| | ||||| | ||| | | |||||| ||||||||| Sbjct 128461 TTAGGCGGTTGCTCCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGA 128402 Query 10759 AAGTGGCAACGGCCTTCTTGTACATCTG 10786 | | || || ||||||||||||||| Sbjct 128401 AGGAAGCTTCGTGCTTCTTGTACATCTG 128374 >seq698 Length=460427 Score = 167 bits (184), Expect = 4e-36 Identities = 178/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | |||||| || || || | |||||||| ||||| ||||| || |||||||| | Sbjct 204040 TTTACTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGT 203981 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| || || | || || || | |||||| || ||||| ||||| | |||||| | Sbjct 203980 AGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGAT 203921 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||||||||||||||| |||||||| ||| ||| ||||||||||| | | Sbjct 203920 CAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAG 203861 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| | ||| || || || ||||| | |||||||| || || ||||| Sbjct 203860 ATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||| || ||||| Sbjct 203576 CCACCACGGAGACGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAT 203517 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| || | || || ||||| || ||| Sbjct 203516 AGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGA 203457 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| ||||||||||| | || || || Sbjct 203456 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACC 203397 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 |||||||||||||| ||||| || |||||||| || Sbjct 203396 TCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||| ||| || |||||||| || ||||| Sbjct 203287 CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAA 203228 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| |||||||| || | || |||||||| || || Sbjct 203227 AGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGG 203168 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||| ||| |||||||| || | ||||| || Sbjct 203167 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACC 203108 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || || ||||||||||||||||| |||||||| Sbjct 203107 TCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | || | ||| || || ||||| || || ||||| || ||| Sbjct 203804 CCACCGCGAAGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTC 203745 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| ||||| || || |||| |||||||||||| || Sbjct 203744 AGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGG 203685 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | |||||| ||||| ||||| | || || || Sbjct 203684 ATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACC 203625 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || ||||| ||||| |||||||| ||||| Sbjct 203624 TCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 >seq27 Length=240170 Score = 167 bits (184), Expect = 4e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || ||| ||| || |||||||| || |||||| Sbjct 62165 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 62224 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || |||| ||||||||||| || Sbjct 62225 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGG 62284 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 62285 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 62343 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 62344 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 62394 >seq737 Length=337091 Score = 145 bits (160), Expect = 1e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || |||||||| || ||||| Sbjct 284528 CCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 284587 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | ||||||||||| || Sbjct 284588 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 284647 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| ||||| || | |||||| ||||||||||| | || || || Sbjct 284648 ATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 284707 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || | |||||| || || ||||| |||||||| ||||| Sbjct 284708 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 284745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921613817391400