Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq334 423 4e-113
seq434 279 1e-69
>seq334
Length=652976
Score = 423 bits (468), Expect = 4e-113
Identities = 621/860 (72%), Gaps = 28/860 (3%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGG-CGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358
|||||| |||||||||||| || || | ||| ||||||||| ||||||||||| ||
Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCT-TCCTTCTGGACCGCTGAGGAGATTGATCT 128426
Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCA 42414
||||||| || |||| || || | || | || | || ||||| ||| ||
Sbjct 128427 CTCCAAGGATCTCCACGACTGG-AGCAACCGCCTAAACGATGATGAGAAGTTCTTCATCT 128485
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || ||||| |||||||| || |||||||| ||||| |||||||| | |
Sbjct 128486 CCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAGC 128545
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| ||| ||||| ||| |||||||| ||||||||||| |||||||| |
Sbjct 128546 GATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGA 128605
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| |
Sbjct 128606 TGGAGAACATCCACTCCGAGACCTACTCT---CTCCTCATTGACACATACATCAAGGAGC 128662
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651
||| | || | | || ||||| ||||| || || || || |||||| | |||||
Sbjct 128663 CCGCCCAGAAGACCCATCTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGG 128722
Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTA 42710
|||||||||| || ||||||||| | | || | | || |||| | || | || |
Sbjct 128723 CGGACTGGGCCCTGCACTGGATCGCT-GACAAGAAGTCCACCTTCGCCCAGCGTTTGATC 128781
Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770
|||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 128782 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 128841
Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829
||| || ||| || |||||||| || |||||||| ||||| |||||| | |||||
Sbjct 128842 AAGAAGCGTGGTCTC-ATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGA 128900
Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC-CCT 42888
||| || || | ||||| |||||||| ||||||||| ||||||| |||| | ||
Sbjct 128901 GGGTCTCCACACCGACTTCGCCTGCCTACTGTTCTCG---CACCTCA---ACAACCGCCC 128954
Query 42889 CG--AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946
|| ||||| |||| | |||||||| || ||||| | |||||| |||| ||| |
Sbjct 128955 CGGCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTT 129014
Query 42947 CACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006
||| || | |||||| |||| ||||||||||| | |||||||| |||||||
Sbjct 129015 GACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCAGTACAT 129074
Query 43007 CCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065
| ||| ||||||||||| ||| || | | ||| | || | | ||| | |
Sbjct 129075 CGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAG-GTGTACCGCGCCA 129133
Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125
| |||||||||||| |||||||||||||| | | |||||||||||||| |||||||
Sbjct 129134 CAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 129193
Query 43126 AGCGCGTCGCCGACTACCAG 43145
||||||||| ||||||||||
Sbjct 129194 AGCGCGTCGGCGACTACCAG 129213
>seq434
Length=564148
Score = 279 bits (308), Expect = 1e-69
Identities = 707/1066 (66%), Gaps = 56/1066 (5%)
Strand=Plus/Minus
Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455
|||||| | |||||| |||||||||||| |||||||| | |||| ||| | |||
Sbjct 552852 GGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCT-----GCCTGGCCTCTGGT 552798
Query 244456 GA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
|| | || |||| || | || ||| || || || ||||| || || | ||
Sbjct 552797 GACTCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGACCCTGAACACCAAGACCA 552738
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||| | ||||||| ||||| | ||| || || |||||||| ||||| ||||
Sbjct 552737 ATGGGACGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCA 552678
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628
|| | |||| |||||| | || | || | | || || || | ||| ||||
Sbjct 552677 ATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTA--ACCTCATGCAACTTCTGGAAGT 552620
Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688
| || || ||| | || || | || || ||| ||| |||| |
Sbjct 552619 CATA-------GGTTCCCTCGTTATAGTCA-----ACGAA-----TGACGGCAACGCAAG 552577
Query 244689 -----CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743
||| |||||| || |||||||| || | | | ||||| || ||||| |||||
Sbjct 552576 GGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCA 552517
Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803
|||||| || || || || |||| || || ||| |||| ||||||| ||
Sbjct 552516 GAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATC 552457
Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863
|||||| ||||||||||| || ||||| ||| || |||| | | | ||| ||
Sbjct 552456 CTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAG 552397
Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGG 244922
| | |||||| | | || ||| ||| | |||||||| ||||| ||||||||
Sbjct 552396 CTTCTGAGCCTTAATCTTCTGGCG-GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGG 552338
Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980
|||| |||||| ||| |||| ||| ||||||| ||||| || | |||||||||||
Sbjct 552337 CCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTG--GGGCACATGAG 552280
Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040
|||||||||| | || ||| | || ||||||||||||||| ||||| || ||| |
Sbjct 552279 GGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAG 552220
Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100
||| || || | || | || ||| ||| |||||| | || |||| || ||
Sbjct 552219 GAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTC 552160
Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160
|| || || |||||| ||||| | |||| || | || || || | |||||||||
Sbjct 552159 GAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCC 552100
Query 245161 TCCCTGGTCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGC 245216
|||||||| | | | || ||| | | ||||||| || || | || || || |
Sbjct 552099 ACCCTGGTCTA----CGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATAC 552044
Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT---GCCCCTGAGGTTGCTGA 245273
|||| ||| |||||| ||||| ||||| | ||| | || || ||| | ||
Sbjct 552043 CGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGT 551984
Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333
|| | || | || ||||| ||||||||| | ||||||| |||| | ||||||
Sbjct 551983 TG---AGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGT 551927
Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393
|| ||||| |||||||| |||||||| | || |||||||| || ||||| | ||
Sbjct 551926 AGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCT 551867
Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
||| | | | ||||| ||||| ||| ||| ||||| |||||
Sbjct 551866 GGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTA 551821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944330405841200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |