Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq334 423 4e-113 seq434 279 1e-69 >seq334 Length=652976 Score = 423 bits (468), Expect = 4e-113 Identities = 621/860 (72%), Gaps = 28/860 (3%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGG-CGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCT 42358 |||||| |||||||||||| || || | ||| ||||||||| ||||||||||| || Sbjct 128368 ATCTGGCAGATGTACAAGAAGCACGAAGCT-TCCTTCTGGACCGCTGAGGAGATTGATCT 128426 Query 42359 GGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCA 42414 ||||||| || |||| || || | || | || | || ||||| ||| || Sbjct 128427 CTCCAAGGATCTCCACGACTGG-AGCAACCGCCTAAACGATGATGAGAAGTTCTTCATCT 128485 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 |||| || ||||| |||||||| || |||||||| ||||| |||||||| | | Sbjct 128486 CCCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAGC 128545 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 | ||| ||||| ||| |||||||| ||||||||||| |||||||| | Sbjct 128546 GATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGA 128605 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591 | |||||| | ||||| ||| ||| | || |||| |||| |||||| ||| | Sbjct 128606 TGGAGAACATCCACTCCGAGACCTACTCT---CTCCTCATTGACACATACATCAAGGAGC 128662 Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGG 42651 ||| | || | | || ||||| ||||| || || || || |||||| | ||||| Sbjct 128663 CCGCCCAGAAGACCCATCTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGG 128722 Query 42652 CGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTA 42710 |||||||||| || ||||||||| | | || | | || |||| | || | || | Sbjct 128723 CGGACTGGGCCCTGCACTGGATCGCT-GACAAGAAGTCCACCTTCGCCCAGCGTTTGATC 128781 Query 42711 GCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTC 42770 |||||| ||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 128782 GCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTC 128841 Query 42771 AAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGA 42829 ||| || ||| || |||||||| || |||||||| ||||| |||||| | ||||| Sbjct 128842 AAGAAGCGTGGTCTC-ATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGA 128900 Query 42830 GGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC-CCT 42888 ||| || || | ||||| |||||||| ||||||||| ||||||| |||| | || Sbjct 128901 GGGTCTCCACACCGACTTCGCCTGCCTACTGTTCTCG---CACCTCA---ACAACCGCCC 128954 Query 42889 CG--AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT 42946 || ||||| |||| | |||||||| || ||||| | |||||| |||| ||| | Sbjct 128955 CGGCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTT 129014 Query 42947 CACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACAT 43006 ||| || | |||||| |||| ||||||||||| | |||||||| ||||||| Sbjct 129015 GACGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCAGTACAT 129074 Query 43007 CCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTC-AGCCGCCTCTACAACACGC 43065 | ||| ||||||||||| ||| || | | ||| | || | | ||| | | Sbjct 129075 CGAGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAG-GTGTACCGCGCCA 129133 Query 43066 CGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGA 43125 | |||||||||||| |||||||||||||| | | |||||||||||||| ||||||| Sbjct 129134 CAAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGA 129193 Query 43126 AGCGCGTCGCCGACTACCAG 43145 ||||||||| |||||||||| Sbjct 129194 AGCGCGTCGGCGACTACCAG 129213 >seq434 Length=564148 Score = 279 bits (308), Expect = 1e-69 Identities = 707/1066 (66%), Gaps = 56/1066 (5%) Strand=Plus/Minus Query 244396 GGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT 244455 |||||| | |||||| |||||||||||| |||||||| | |||| ||| | ||| Sbjct 552852 GGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCT-----GCCTGGCCTCTGGT 552798 Query 244456 GA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 || | || |||| || | || ||| || || || ||||| || || | || Sbjct 552797 GACTCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGACCCTGAACACCAAGACCA 552738 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||||||| ||||| | ||| || || |||||||| ||||| |||| Sbjct 552737 ATGGGACGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCA 552678 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCA--TGCGGACGACGTCGGCCAGCAGCTGAAAGT 244628 || | |||| |||||| | || | || | | || || || | ||| |||| Sbjct 552677 ATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTA--ACCTCATGCAACTTCTGGAAGT 552620 Query 244629 CGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGG 244688 | || || ||| | || || | || || ||| ||| |||| | Sbjct 552619 CATA-------GGTTCCCTCGTTATAGTCA-----ACGAA-----TGACGGCAACGCAAG 552577 Query 244689 -----CCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 ||| |||||| || |||||||| || | | | ||||| || ||||| ||||| Sbjct 552576 GGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCA 552517 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 |||||| || || || || |||| || || ||| |||| ||||||| || Sbjct 552516 GAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATC 552457 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 |||||| ||||||||||| || ||||| ||| || |||| | | | ||| || Sbjct 552456 CTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAG 552397 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTG-CCCTCTGCCTCGTAGCGGGTGTACAGGG 244922 | | |||||| | | || ||| ||| | |||||||| ||||| |||||||| Sbjct 552396 CTTCTGAGCCTTAATCTTCTGGCG-GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGG 552338 Query 244923 CCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAG 244980 |||| |||||| ||| |||| ||| ||||||| ||||| || | ||||||||||| Sbjct 552337 CCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTG--GGGCACATGAG 552280 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 |||||||||| | || ||| | || ||||||||||||||| ||||| || ||| | Sbjct 552279 GGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAG 552220 Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100 ||| || || | || | || ||| ||| |||||| | || |||| || || Sbjct 552219 GAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTC 552160 Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160 || || || |||||| ||||| | |||| || | || || || | ||||||||| Sbjct 552159 GAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCC 552100 Query 245161 TCCCTGGTCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGC 245216 |||||||| | | | || ||| | | ||||||| || || | || || || | Sbjct 552099 ACCCTGGTCTA----CGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATAC 552044 Query 245217 CGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTT---GCCCCTGAGGTTGCTGA 245273 |||| ||| |||||| ||||| ||||| | ||| | || || ||| | || Sbjct 552043 CGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGT 551984 Query 245274 TGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTG 245333 || | || | || ||||| ||||||||| | ||||||| |||| | |||||| Sbjct 551983 TG---AGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGT 551927 Query 245334 CTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT 245393 || ||||| |||||||| |||||||| | || |||||||| || ||||| | || Sbjct 551926 AGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCT 551867 Query 245394 TGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| | | | ||||| ||||| ||| ||| ||||| ||||| Sbjct 551866 GGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTA 551821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944330405841200