Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq27 163 7e-35
seq698 149 1e-30
seq737 114 3e-20
seq334 109 1e-18
>seq27
Length=240170
Score = 163 bits (180), Expect = 7e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| |||| ||||| || || ||||| || ||||||| |
Sbjct 62165 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 62224
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | ||| || || ||||||||||| |||||||| |||
Sbjct 62225 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGG 62284
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
||||| || || |||||||| || | || || || || || | |||||||| || ||
Sbjct 62285 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 62344
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476
|| || ||||| ||||| || || || ||||||||||| |||||||| ||
Sbjct 62345 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 62394
>seq698
Length=460427
Score = 149 bits (164), Expect = 1e-30
Identities = 173/232 (75%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| || || | || || || || | ||||| || || ||||| || ||||
Sbjct 203291 CATG-CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGT 203233
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || ||||| |||||||| | ||| ||||| ||||| |||| |||||||| |
Sbjct 203232 CGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAG 203173
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| |||| || ||||| || || | ||| ||||
Sbjct 203172 GGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATT 203113
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || || ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct 203112 CGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061
>seq737
Length=337091
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| || | ||| || || ||||| || |||||||
Sbjct 284528 CCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 284587
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || ||||| || | ||| || || |||||||||||||||||||| |||
Sbjct 284588 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 284647
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| ||||| | || || || || || | ||| || || ||
Sbjct 284648 ATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 284707
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
||||| ||||| ||||| || || || ||||| |||||
Sbjct 284708 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 284745
>seq334
Length=652976
Score = 109 bits (120), Expect = 1e-18
Identities = 139/189 (74%), Gaps = 2/189 (1%)
Strand=Plus/Plus
Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212
|||| ||||| ||| | |||||||| || || ||||| ||||| || || ||| | ||
Sbjct 129041 TCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGG 129100
Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAA 269272
|| |||||| | ||||| |||||| | | || ||||||| ||| ||||| |
Sbjct 129101 TCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACA 129160
Query 269273 TTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCT 269331
| || |||| || ||||| ||||||||||| ||||| ||| ||||||| || | | ||
Sbjct 129161 TCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCC- 129219
Query 269332 GGTGTAATG 269340
||||| |||
Sbjct 129220 GGTGTCATG 129228
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179643139830110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |