Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq27 163 7e-35 seq698 149 1e-30 seq737 114 3e-20 seq334 109 1e-18 >seq27 Length=240170 Score = 163 bits (180), Expect = 7e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||||| || || ||||| || ||||||| | Sbjct 62165 CCACCACGGAGGCGGAGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 62224 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | ||| || || ||||||||||| |||||||| ||| Sbjct 62225 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGG 62284 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||| || || |||||||| || | || || || || || | |||||||| || || Sbjct 62285 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 62344 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 62345 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 62394 >seq698 Length=460427 Score = 149 bits (164), Expect = 1e-30 Identities = 173/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || || || || | ||||| || || ||||| || |||| Sbjct 203291 CATG-CCACCACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGT 203233 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| || ||||| |||||||| | ||| ||||| ||||| |||| |||||||| | Sbjct 203232 CGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAG 203173 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| |||| || ||||| || || | ||| |||| Sbjct 203172 GGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATT 203113 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 203112 CGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 203061 >seq737 Length=337091 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||| || || ||||| || ||||||| Sbjct 284528 CCACCACGGAGACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAA 284587 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | ||| || || |||||||||||||||||||| ||| Sbjct 284588 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGG 284647 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| ||||| | || || || || || | ||| || || || Sbjct 284648 ATGCCCTCCTTGTCCTGAATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 284707 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 ||||| ||||| ||||| || || || ||||| ||||| Sbjct 284708 TCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCACGAA 284745 >seq334 Length=652976 Score = 109 bits (120), Expect = 1e-18 Identities = 139/189 (74%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 269153 TCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCA 269212 |||| ||||| ||| | |||||||| || || ||||| ||||| || || ||| | || Sbjct 129041 TCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTATTGG 129100 Query 269213 CGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAA 269272 || |||||| | ||||| |||||| | | || ||||||| ||| ||||| | Sbjct 129101 TCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAGAACA 129160 Query 269273 TTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCT 269331 | || |||| || ||||| ||||||||||| ||||| ||| ||||||| || | | || Sbjct 129161 TCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAGGCC- 129219 Query 269332 GGTGTAATG 269340 ||||| ||| Sbjct 129220 GGTGTCATG 129228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179643139830110