Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq334 120 7e-22 >seq334 Length=652976 Score = 120 bits (132), Expect = 7e-22 Identities = 180/253 (71%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||||||| || || | | ||| |||||||| | || || | || ||| Sbjct 128977 ATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTTGACGGAGGCACTGCCCTGCGCC 129036 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||| | | |||||| ||||||||||| ||||| |||||||| | Sbjct 129037 CTACTCGGCATGAACGCCAACCTCATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTA 129096 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || |||| || ||| | ||||| |||||| | ||| |||||||| | ||| |||||| Sbjct 129097 TTGGTCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAAACCCCTTCGACTTCATGGAG 129156 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740 ||| || || || || || ||||||||||| ||||| ||| | || || || | | Sbjct 129157 AACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCGACTACCAGAAG 129216 Query 243741 CCCTGGTGTGATG 243753 || ||||| ||| Sbjct 129217 GCC-GGTGTCATG 129228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102869472665750