Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq27 125 8e-24
seq698 100 3e-16
>seq27
Length=240170
Score = 125 bits (138), Expect = 8e-24
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | ||||| || |||| || || ||||| ||
Sbjct 62195 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 62254
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
||||| || |||||||| ||||||| || | | |||||||||| ||| || |||
Sbjct 62255 GCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTGGACTTG 62314
Query 42132 AGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTC 42191
| | | | ||||||||||| ||||| || | ||||| || |||||||| || |||
Sbjct 62315 ACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTC 62374
Query 42192 TTTACAAAGATTTGCAT 42208
|| || ||||| |||||
Sbjct 62375 TTGACGAAGATCTGCAT 62391
>seq698
Length=460427
Score = 100 bits (110), Expect = 3e-16
Identities = 166/237 (70%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032
||||| | ||||| | | ||| | ||||| || | || |||||| || || |||
Sbjct 204041 ATTTACTGTCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTG 203982
Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092
|| || |||||| || |||| || |||||||| |||||||| ||||| || || ||
Sbjct 203981 TAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGA 203922
Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCT 42151
|| | || | || ||||||||| ||| | || | | ||| | | | ||||||
Sbjct 203921 TCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGA 203863
Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||||| || |||| || || || || ||||| | ||||| ||||||||||||||
Sbjct 203862 AGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | ||||| || |||| || || ||||| ||
Sbjct 203257 GTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCG 203198
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
||||| || | |||||| ||||| | || | || |||||||||| || | || | |
Sbjct 203197 GCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCC-TGGATCTTCGACTT 203139
Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190
| ||| | | | || || ||||| || || | |||||||| ||||| || || ||
Sbjct 203138 AACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGT 203079
Query 42191 CTTTACAAAGATTTGCATTTT 42211
||| || ||||| ||||| ||
Sbjct 203078 CTTGACGAAGATCTGCATCTT 203058
Score = 87.8 bits (96), Expect = 2e-12
Identities = 130/182 (71%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | || || || | || || |||||||| || |||||
Sbjct 203540 TCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 203481
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| | |||||||||||| | || | || |||||||||| ||| | || | |||| |
Sbjct 203480 ATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATT 203422
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | |||||| ||| || || || | |||||||| || || || || ||||||||
Sbjct 203421 GTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTAC 203362
Query 42197 AA 42198
||
Sbjct 203361 AA 203360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543207741330800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |