Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq27 86.0 6e-12 seq698 84.2 2e-11 >seq27 Length=240170 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || || || |||||||| || | || ||||| |||| Sbjct 62180 AGCACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCC 62239 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || ||||||||||| | || || ||||| |||||||| || ||||| || || || Sbjct 62240 TCGAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCC 62299 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | | ||||| || | || | ||| Sbjct 62300 TGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTC 62359 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 62360 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391 >seq698 Length=460427 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | | ||||| |||||||||| ||||| ||||| || Sbjct 203251 TCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCGGCGAAA 203192 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||| ||||| || || || || || || || || || || ||| || Sbjct 203191 ATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTG 203132 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| || || || || | ||| | |||||||||||| | || || ||| Sbjct 203131 TCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACG 203072 Query 64433 AAAATTTGCATTTT 64446 || || ||||| || Sbjct 203071 AAGATCTGCATCTT 203058 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || || |||||||| || | | ||| || | || Sbjct 203561 AGGACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCC 203502 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||||||||| | || | ||||||||||| |||||||| || || || || Sbjct 203501 TCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 203442 Query 64352 TGTATTTT 64359 || || || Sbjct 203441 TGAATCTT 203434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499640147057800