Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq434 230 2e-55
>seq434
Length=564148
Score = 230 bits (254), Expect = 2e-55
Identities = 613/923 (66%), Gaps = 14/923 (2%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| ||||| || || || |||||| | || |
Sbjct 551656 AACTACCAATACTTCGGCTTCAAGACTTTGGAGCGATCATATCTGCTCAAGCTTGACGAT 551715
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | | |||| ||||||| || || | ||||| || || |||| || || |
Sbjct 551716 AAGATCGTCGAGAGACCGCAGCACATGATCATGCGTGTGGCTGTCGGCATCTGGGGTGAT 551775
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATG-CGGGACAAGAGGTATACCATGGC 93893
|| || ||| ||| | | | | | | |||| | | || | | ||||| |
Sbjct 551776 GATGTGGAGAAGGTTATACAGACCTATAACCTCATGTCCAGCAAATACTTCACCCATG-C 551834
Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GA 93952
| |||| || || ||||| || || || || | | ||| | || || || ||||| |
Sbjct 551835 CTCCCCAACTCTCTTCAATGCTGGAACACCCCAGGCTCAGCTCTCATCCTGCTTCCTCGT 551894
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
|||| | |||| |||| ||| || || | ||||| ||| ||| ||| || | |
Sbjct 551895 TGAC-ATGAAGGACGACAGCATTGAGGGTATCTACGACACCCTTAAGACCTGCGCCATGA 551953
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| || || || || || || ||| ||||| | | || || | || || |
Sbjct 551954 TCTCCAAGATGGCCGGTGGTATTGGTCTCAACATCCACCGCATTCGCGCTACCGGCTCAT 552013
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
|||| ||| || || |||||||| ||||| | || || |||||||| |||||||| |
Sbjct 552014 ACATTGCCGGCACTAACGGCACCTCGAACGGTATTGTACCCATGCTCCGTGTCTTCAATA 552073
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | || | ||||| ||||||||||| | ||| ||| |||| || ||||||
Sbjct 552074 ACACTGCTAGATACGTAGACCAGGGTGGCAACAAGAGACCTGGTGCTTTTGCCATCTATC 552133
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
||||||| |||||| |||| || | ||| | ||||| ||||||||||||||||| |
Sbjct 552134 TCGAGCCTTGGCACTCGGATGTTTTCGAGTTCCTGGACCTTCGAAAGAACCACGGCAAGG 552193
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | | ||| | || || ||| ||||| ||| | || ||||| || ||||| |
Sbjct 552194 AAGAAGTCCGTGCCCGTGATCTTTTCCTGGCTCTTTGGATTCCCGACCTCTTCATGAAGC 552253
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| |||||||| || || |||| || | || ||||| ||||| || || || |||
Sbjct 552254 GTGTCGAGAAGAATGGCGAGTGGACCCTCATGTGCCCCAACGAATGCCCTGGCCTAGCCG 552313
Query 94373 ACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGC 94430
| || | ||| || | ||||| | | |||| | |||||| | |||| | |||
Sbjct 552314 ATGTCTATGGCGACGAG-TTTGAGGCCCTGTACGAGAAGTACGAAGCAGAGGGTCGTGGC 552372
Query 94431 --CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAG 94488
| |||| ||| | ||| |||||||||| || || | || | ||| |||
Sbjct 552373 CGCCAGAAGATTA---AGGCTCAGAAGCTGTGGTATGCCATTCTCGAAGCTCAGACTGAG 552429
Query 94489 ACGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547
|| || | |||| ||| | | |||||| | ||| |||| |||| ||||||| || |
Sbjct 552430 ACTGGAAACCCCTTCATGCTTTACAAGGATCACTG-CAACCGCAAGAGCAACCAGAAGAA 552488
Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607
||| || || |||||||| || ||||| ||||| ||||||| || | || ||
Sbjct 552489 CCTTGGTACTATTCGCAGCTCGAACCTCTGCACTGAGATCATCGAGTACTCTGCCCCTGA 552548
Query 94608 CGAGATTGCTGTGTGTAACCTGG 94630
|||| | ||||| || ||| |||
Sbjct 552549 CGAGGTGGCTGTTTGCAACTTGG 552571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494718592890200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |