Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq698 105 5e-18 seq737 84.2 2e-11 seq27 82.4 5e-11 >seq698 Length=460427 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || || ||||| || || || |||||||| ||||| ||| | | |||| || Sbjct 204015 AACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTC 203956 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || |||||| | || | ||| ||||| || ||||| ||||||||||| Sbjct 203955 CAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTG 203896 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| ||||| || || | || || || ||| | ||| || || | |||||| || || Sbjct 203895 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTT 203836 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| || || ||||| ||||||||| Sbjct 203835 CCCCGTCAATGTCTTGACAAAGATTTGCATA 203805 >seq737 Length=337091 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || |||||||| ||| ||| ||| |||| || | ||| Sbjct 284552 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGC 284611 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| ||||||||||||| || || || |||||||| ||||||| Sbjct 284612 TTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTG 284671 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||| | || || || | ||| || || ||||| || Sbjct 284672 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTA 284731 Query 15154 AGAGTTTTTACAAA 15167 || || || || || Sbjct 284732 AGGGTCTTCACGAA 284745 >seq27 Length=240170 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || || || |||||||| ||| |||| | | |||| || | ||| Sbjct 62189 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGC 62248 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | |||| |||||||||||| || ||||| |||||||| || ||| Sbjct 62249 TTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTG 62308 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || ||||| || || || | ||| || || || || || Sbjct 62309 GACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 62368 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || || || || || || ||||| Sbjct 62369 AGGGTCTTGACGAAGATCTGCAT 62391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357388754992325