Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq698 105 5e-18
seq737 84.2 2e-11
seq27 82.4 5e-11
>seq698
Length=460427
Score = 105 bits (116), Expect = 5e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026
||| || || || ||||| || || || |||||||| ||||| ||| | | |||| ||
Sbjct 204015 AACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTC 203956
Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086
| || || |||||| | || | ||| ||||| || ||||| |||||||||||
Sbjct 203955 CAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTG 203896
Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146
||| ||||| || || | || || || ||| | ||| || || | |||||| || ||
Sbjct 203895 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTT 203836
Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| |||| || || ||||| |||||||||
Sbjct 203835 CCCCGTCAATGTCTTGACAAAGATTTGCATA 203805
>seq737
Length=337091
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|| || || || || || || |||||||| ||| ||| ||| |||| || | |||
Sbjct 284552 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGC 284611
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||| ||| | |||| ||||||||||||| || || || |||||||| |||||||
Sbjct 284612 TTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTG 284671
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || || ||| | || || || | ||| || || ||||| ||
Sbjct 284672 GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTA 284731
Query 15154 AGAGTTTTTACAAA 15167
|| || || || ||
Sbjct 284732 AGGGTCTTCACGAA 284745
>seq27
Length=240170
Score = 82.4 bits (90), Expect = 5e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033
|||||||| || || || |||||||| ||| |||| | | |||| || | |||
Sbjct 62189 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGC 62248
Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093
||||| ||| | |||| |||||||||||| || ||||| |||||||| || |||
Sbjct 62249 TTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTG 62308
Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153
|| ||| | || || || ||||| || || || | ||| || || || || ||
Sbjct 62309 GACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 62368
Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176
|| || || || || || |||||
Sbjct 62369 AGGGTCTTGACGAAGATCTGCAT 62391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357388754992325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |