Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq698 104 2e-17 >seq698 Length=460427 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45113 TCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCT 45172 |||||| ||||| | | || | || ||||| || ||||| ||||| || || ||||| Sbjct 204033 TCCTCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCT 203974 Query 45173 GACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGG 45232 | || | || |||| || ||||| ||| | || | ||||| || || || || Sbjct 203973 CAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGG 203914 Query 45233 AATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGA 45291 ||||||||| || || ||||| || || | || | || | |||||||||||| || | Sbjct 203913 AATGCCTTCCTTGTCCTGAATCTTGCTCTTCA-CGTTGTCGATGGTGTCGGAAGATTCAA 203855 Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| |||| || || || || | || || ||||| |||||||| Sbjct 203854 CTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998990720200