Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq334 158 1e-33 seq434 123 3e-23 >seq334 Length=652976 Score = 158 bits (174), Expect = 1e-33 Identities = 536/825 (65%), Gaps = 39/825 (5%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| ||||| ||| |||||||| Sbjct 129210 GTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 129151 Query 127291 AAAATCAAATGGGTTCTTTGAGT--TCCAAATTGTTGGCACC--------CCAATCTGTT 127340 || || || ||||| | | | | || || | | ||| ||||| Sbjct 129150 GAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGAGGGCGACCAAT----- 129096 Query 127341 TGAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGA 127400 ||||| || | |||| |||| ||||||| ||| | | |||||| |||| Sbjct 129095 -----AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGA 129041 Query 127401 TGAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTA 127460 ||| || || || || ||| | ||| ||| ||| ||| | || || || | Sbjct 129040 GTAGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGA 128981 Query 127461 CGATGGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTCCACA 127519 ||| || | ||| || || | ||| | | || | ||| ||| Sbjct 128980 TGATCTTCTGGACGACATCCTTGCCGGGGCGGTTGT-TGAGGTGCGAGAACAGTAGGCAG 128922 Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 || || || |||||||||||||||||| |||||||| || || |||||| ||| || Sbjct 128921 GCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCG 128862 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| || | || | || ||||||||| Sbjct 128861 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATG 128802 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCA 127696 ||||| || || || || | | ||||| ||| |||| ||||| |||| | | Sbjct 128801 CCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGG---TGGACTTCTTGTCAGCG 128745 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| | || ||||| | ||||| | ||| || |||| ||| | ||| || | Sbjct 128744 ATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTG 128685 Query 127757 AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 127816 ||||| | |||| | | || || |||||||| | || ||||| || || || Sbjct 128684 AAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTC 128625 Query 127817 TCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 127875 ||| ||||| | | ||| || | ||| | ||||||| | ||||| ||| || Sbjct 128624 TCGGAGTGGATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAAT 128566 Query 127876 CTGTACCTCATCGGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCC 127932 ||| ||||| | | | ||| | | || | ||||| ||||| || ||||| | Sbjct 128565 CTGGACCTCGCCAG-AGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGC 128509 Query 127933 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 127989 || ||||| || ||||| | ||||| || |||| ||||| | || | | Sbjct 128508 GGCGAAAAAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCT 128449 Query 127990 CCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||||| ||||||||| |||||||| | |||||| || ||||| Sbjct 128448 CCAGTCGTGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404 >seq434 Length=564148 Score = 123 bits (136), Expect = 3e-23 Identities = 823/1303 (63%), Gaps = 35/1303 (3%) Strand=Plus/Minus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 |||||| || | ||||| ||||| ||||| ||||||||||||| ||| |||| || Sbjct 553110 ATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACT 553051 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 |||||| |||||||| || | | | ||||||||| | ||| | |||| || Sbjct 553050 GGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTC 552991 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCC---CCTCCCACATATCAAACTG 116078 ||| ||| |||||| || || | | | | | |||||| || | || Sbjct 552990 CTTTAGGCTTGTCCAGTCCCAG---AGATCCGACGGGGTGACATTCCACATGTCGTATTG 552934 Query 116079 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 116138 |||||||| || || | || || || ||| | || || || || ||||||| || Sbjct 552933 AAGGATACCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGC 552874 Query 116139 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT 116198 | || || ||| | ||| || || || |||||||| || || | |||| Sbjct 552873 AATATCCGAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAG 552814 Query 116199 -TGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGAC 116257 ||||| |||||| || || || | | || | | ||| ||| || |||| Sbjct 552813 CTGCCT-GGCCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGAC 552755 Query 116258 CTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACG 116316 | || ||||| || ||||| || || |||| ||| || || || || ||| ||| Sbjct 552754 CCTGAACACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACG 552696 Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 || || | || || || | || || || || | ||| || | || | ||| Sbjct 552695 GGGTAGTAGTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCA 552636 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GC 116432 || | ||| | | | ||| | | | ||| | || | || || | || || || Sbjct 552635 TGCAACTTCTGGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAACGC 552580 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 | || |||| || || |||| ||| || ||| |||||| || || || || Sbjct 552579 AAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGT 552520 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 || | || || || ||| || || | |||||| || || ||| ||| || Sbjct 552519 GCAGAGGTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTG 552460 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||||| ||||| | || | || ||||| || || | | |||||| || | ||| Sbjct 552459 ATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCA 552400 Query 116613 TA-CATCGGCGGCTGGCACAG-TGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAG 116670 | | || | | || | ||||| | | || ||||| | |||||||| ||| Sbjct 552399 CAGCTTCTGAGCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGTAC 552342 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGA-CAGA 116728 |||||||||||||| || || | || | || | || || || || || ||| || | Sbjct 552341 AGGGCCTCAAACTCGTCGCC-ATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCACA 552284 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 ||| | ||| | ||| || ||| || ||||||||||||||||| || ||||| || | Sbjct 552283 TGAGGGTCCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAG 552224 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 || ||| ||||| || || ||||||| | || || || || | |||| | Sbjct 552223 CCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGA 552164 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGA 116904 | || | | ||||| |||||| || || || || | || | | ||| || | Sbjct 552163 ACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGT 552104 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 | ||| |||||| ||| || || || || || || || || ||||| || | ||| Sbjct 552103 TG-CCACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATA 552045 Query 116965 CCATCAGATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGA 117022 || | || ||| || || || || || ||| | | | || | | ||||| Sbjct 552044 CCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCC--GGTAGCGCGAATGCGGTGGA 551987 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 ||| | ||||||||| || ||| ||| ||||| ||||| | | || || ||| Sbjct 551986 TGTTGAGACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGT 551927 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 |||| || || || ||| |||| | | | |||||||||| || | || | | Sbjct 551926 AGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCT 551867 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 ||||| ||||| |||||||| ||||| | || ||| |||| Sbjct 551866 GGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA 551824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613501486714200