Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq27 158 1e-33
seq698 136 4e-27
seq737 120 3e-22
>seq27
Length=240170
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | || |||||||| ||||| ||||||||||| |||||||| |||| ||
Sbjct 62182 CACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTC 62241
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||| |||||||||||||| |||| ||||| ||||||| || | | ||||||||||
Sbjct 62242 GAGTTGCTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTG 62301
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | ||||||||||| ||||| || | ||||| || ||
Sbjct 62302 GATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTT 62361
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||| || || || || ||||| |||||
Sbjct 62362 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 62391
>seq698
Length=460427
Score = 136 bits (150), Expect = 4e-27
Identities = 153/202 (76%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||||||||| |||||||| |||| || || ||||| |||
Sbjct 203257 GTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCG 203198
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| ||||| ||||| ||||| | || | || |||||||||| ||||||| |||
Sbjct 203197 GCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTT- 203139
Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGT 46575
| ||| | | | || || ||||| || || | |||||||| ||||| || || ||
Sbjct 203138 AACGTTGTCGATGGTATCCGAGGATTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGT 203079
Query 46576 TTTAACAAAGATTTGCATTTTG 46597
|| || ||||| ||||| |||
Sbjct 203078 CTTGACGAAGATCTGCATCTTG 203057
Score = 129 bits (142), Expect = 7e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||||||||| || || | || || |||||||||||||||||
Sbjct 203540 TCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 203481
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
||||| ||||||||||| | || | || |||||||||| |||||| ||||| |
Sbjct 203480 ATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTG 203421
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||| ||| || || |||| |||||||| || || || || || || |||
Sbjct 203420 TCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTACA 203361
Query 46583 A 46583
|
Sbjct 203360 A 203360
Score = 102 bits (112), Expect = 9e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| |||||||| |||| || |||||||| || |||||
Sbjct 203997 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTCCAGCTGCTTTCCAGCGAA 203938
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | || || || || | || | || ||||||||| ||||| |||| | |||
Sbjct 203937 GATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTGCTCTTCA-CGT 203879
Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| ||||| || || | || || || || ||||||| || || |
Sbjct 203878 TGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTTCCCCGTCAATGTCTTGA 203819
Query 46581 CAAAGATTTGCAT 46593
|||||||||||||
Sbjct 203818 CAAAGATTTGCAT 203806
>seq737
Length=337091
Score = 120 bits (132), Expect = 3e-22
Identities = 145/196 (74%), Gaps = 1/196 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| ||||| || |||| ||||| ||||||||||||||
Sbjct 284563 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 284622
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| ||||| ||||||| || | || |||||||||| || || ||||| |
Sbjct 284623 GATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATTTTGGACTTGACATT 284682
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || ||||| || | ||||| || || ||||| || || || ||
Sbjct 284683 GTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTAAGGGTCTTCAC 284742
Query 46582 AAAGAT-TTGCATTTT 46596
||| | ||| |||||
Sbjct 284743 GAAGCTATTGAATTTT 284758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565233136217400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |