Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq334 275 6e-69
seq27 131 2e-25
seq698 113 5e-20
seq737 105 7e-18
>seq334
Length=652976
Score = 275 bits (304), Expect = 6e-69
Identities = 574/845 (68%), Gaps = 15/845 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||||| || ||||| || || || || || || | | ||| ||| |
Sbjct 129215 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTC 129156
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||| | | | ||| ||| | | |||| || ||||
Sbjct 129155 TCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGA---GGGCGACC 129099
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779
| || | |||||| |||||||||||||| ||| |||| | || || | | | || ||
Sbjct 129098 AATAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATG-CCGAG 129040
Query 132780 CAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838
|| |||| ||||| || || || | || |||||||||||||| || || ||||
Sbjct 129039 TAGGGCGCAG-GGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGA 128981
Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898
||| | | ||| || || || || | | ||| ||||| | ||| |
Sbjct 128980 TGATCTTCTGGACGACATCCTTGCCGGGGCGGTTGTTGAGGTGCGAGAACAGTAGGCAGG 128921
Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958
| |||||| || | |||||||| | || ||||| ||||| ||| |||| |||||
Sbjct 128920 CGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGG 128861
Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018
||||||| || || || |||||||| || |||| |||||| || ||||||| ||
Sbjct 128860 GCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGC 128801
Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCGATC 133077
|||||||||| || || || | || |||| | |||| |||| |||||| | | |||||
Sbjct 128800 CCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAG-CGATC 128742
Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137
||| |||| ||||| || ||||| || ||| || || || ||||||||||| ||
Sbjct 128741 CAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAG 128682
Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197
| | || |||| | | | ||| ||||| |||||| || || | ||
Sbjct 128681 AGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCG 128622
Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257
||||| | ||||||||| ||| || || ||||| ||||| ||||||||| | |||
Sbjct 128621 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGG 128562
Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317
|| || || ||| |||||||| || || |||||||| ||||||||| |||||||||
Sbjct 128561 ACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAA 128502
Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT---CCCAGTCG 133374
||||| || | ||| |||||| ||| | ||||| | ||| | |||||||
Sbjct 128501 AAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCG 128442
Query 133375 CGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434
| |||||||| || || | |||||| ||||||| || || || ||| || |||
Sbjct 128441 TGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAAGCTTCGTGCTTCTTG 128382
Query 133435 TACAT 133439
|||||
Sbjct 128381 TACAT 128377
>seq27
Length=240170
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | |
Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| |||||||| ||| ||||||||
Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| || || || |||| ||||| ||| ||||||||||
Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212
Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| ||| || || || | ||||| ||
Sbjct 62211 ATCCAGAAGGAGAGC-ACCCTTCACCTCGTGCTCCG 62177
>seq698
Length=460427
Score = 113 bits (124), Expect = 5e-20
Identities = 168/233 (72%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| ||
Sbjct 203058 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCC 203117
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
| || | | | | |||| |||| || |||| ||||| ||||| || ||| | ||
Sbjct 203118 TCGGATACCATCGACAACG-TTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 203176
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| | |||| ||| || || || || || |||| ||||| || ||||||
Sbjct 203177 CCAACAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTA 203236
Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||| ||||| ||| || || || | || || ||| || | || |||
Sbjct 203237 CAACATCCAGAAGGAGAGC-ACTCTCCACCTTGTCCTCCGTCTGCGTGGTGGC 203288
Score = 113 bits (124), Expect = 5e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||||||||| || || ||||| ||||| || |||||| | || || ||| | |
Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | ||| || |||| ||||| |||||||| || |||||||
Sbjct 203638 GACACGATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCA 203696
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| || || || | || || || ||| |||| || | || || || | |||||||||
Sbjct 203697 ACAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAA 203756
Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446
||| || ||||| |||| |||||
Sbjct 203757 CATTCAGAAGGAGTCGACCCTGCA 203780
Score = 113 bits (124), Expect = 5e-20
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || || | ||||| || || || ||| |||| || || | ||
Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || || | ||||| || || ||||| | || |
Sbjct 203866 GACACCATCGACAACG--TGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATC 203923
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
|||| || ||||| | ||| || || |||||||| |||| ||||| || | ||||||||
Sbjct 203924 AACAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACA 203983
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| | ||||| || ||||| || |||
Sbjct 203984 ACATCCAGAAGGAGTCTACGCTCCACTTGGTTCTCCGT 204021
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 38248 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA 38307
||| | | ||||| || || || || || ||||||||| | || |||||| | ||||||
Sbjct 203354 AAACAGTTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACA 203413
Query 38308 GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGC 38367
| | | | | || || || | ||||| ||||| ||||| | ||||| ||||
Sbjct 203414 CCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 203473
Query 38368 GGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 38427
| | || | ||| ||||| ||||| || || | || ||||| ||||||||||||||
Sbjct 203474 GATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCC 203533
Query 38428 AAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
| |||||| | || || || | || || |||
Sbjct 203534 AGAAGGAATCCACTCTTCACCTCGTCCTCCGT 203565
>seq737
Length=337091
Score = 105 bits (116), Expect = 7e-18
Identities = 141/195 (72%), Gaps = 1/195 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAA-ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||||| ||| | ||||| || || || ||||| || || |||||| |||| || ||| |
Sbjct 284758 AAAATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTC 284699
Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | | | || ||||| | ||||| ||||| || ||| ||||
Sbjct 284698 TTCCGACACCATCGACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGA 284639
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| || || | ||| ||||| || || || |||| || || || ||||||
Sbjct 284638 CCAACAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTA 284579
Query 38420 CAACATCCAAAAGGA 38434
||||||||| |||||
Sbjct 284578 CAACATCCAGAAGGA 284564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500168142140800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |