Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq334 275 6e-69 seq27 131 2e-25 seq698 113 5e-20 seq737 105 7e-18 >seq334 Length=652976 Score = 275 bits (304), Expect = 6e-69 Identities = 574/845 (68%), Gaps = 15/845 (2%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || || || ||||| || ||||| || || || || || || | | ||| ||| | Sbjct 129215 TTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTC 129156 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||| | | | ||| ||| | | |||| || |||| Sbjct 129155 TCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGA---GGGCGACC 129099 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 | || | |||||| |||||||||||||| ||| |||| | || || | | | || || Sbjct 129098 AATAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATG-CCGAG 129040 Query 132780 CAGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 || |||| ||||| || || || | || |||||||||||||| || || |||| Sbjct 129039 TAGGGCGCAG-GGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGA 128981 Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898 ||| | | ||| || || || || | | ||| ||||| | ||| | Sbjct 128980 TGATCTTCTGGACGACATCCTTGCCGGGGCGGTTGTTGAGGTGCGAGAACAGTAGGCAGG 128921 Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958 | |||||| || | |||||||| | || ||||| ||||| ||| |||| ||||| Sbjct 128920 CGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGG 128861 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018 ||||||| || || || |||||||| || |||| |||||| || ||||||| || Sbjct 128860 GCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGC 128801 Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGCGATC 133077 |||||||||| || || || | || |||| | |||| |||| |||||| | | ||||| Sbjct 128800 CCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAG-CGATC 128742 Query 133078 CAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAAC 133137 ||| |||| ||||| || ||||| || ||| || || || ||||||||||| || Sbjct 128741 CAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAG 128682 Query 133138 AAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATACATTTCC 133197 | | || |||| | | | ||| ||||| |||||| || || | || Sbjct 128681 AGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCG 128622 Query 133198 GAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGC 133257 ||||| | ||||||||| ||| || || ||||| ||||| ||||||||| | ||| Sbjct 128621 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGG 128562 Query 133258 ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAA 133317 || || || ||| |||||||| || || |||||||| ||||||||| ||||||||| Sbjct 128561 ACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAA 128502 Query 133318 AAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCT---CCCAGTCG 133374 ||||| || | ||| |||||| ||| | ||||| | ||| | ||||||| Sbjct 128501 AAGGCAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCG 128442 Query 133375 CGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTG 133434 | |||||||| || || | |||||| ||||||| || || || ||| || ||| Sbjct 128441 TGGAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAAGGAAGCTTCGTGCTTCTTG 128382 Query 133435 TACAT 133439 ||||| Sbjct 128381 TACAT 128377 >seq27 Length=240170 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 62391 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 62332 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| |||||||| ||| |||||||| Sbjct 62331 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCCGACCAA 62272 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| || || || |||| ||||| ||| |||||||||| Sbjct 62271 CAGCGACTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTCTCCGACTACAAC 62212 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| ||| || || || | ||||| || Sbjct 62211 ATCCAGAAGGAGAGC-ACCCTTCACCTCGTGCTCCG 62177 >seq698 Length=460427 Score = 113 bits (124), Expect = 5e-20 Identities = 168/233 (72%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || ||||| ||||| |||||||| | || ||||| || Sbjct 203058 AAGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAATCC 203117 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | || | | | | |||| |||| || |||| ||||| ||||| || ||| | || Sbjct 203118 TCGGATACCATCGACAACG-TTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCCCCTGA 203176 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| | |||| ||| || || || || || |||| ||||| || |||||| Sbjct 203177 CCAACAGCGATTGATTTTCGCCGGAAAGCAACTTGAAGACGGTCGCACTCTTTCCGACTA 203236 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| ||||| ||| || || || | || || ||| || | || ||| Sbjct 203237 CAACATCCAGAAGGAGAGC-ACTCTCCACCTTGTCCTCCGTCTGCGTGGTGGC 203288 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || ||||| ||||| || |||||| | || || ||| | | Sbjct 203578 ATGCAAATATTCGTGAAGACTCTCACTGGCAAGACAATCACCCTTGAGGTGGAGTCTTCG 203637 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | ||| || |||| ||||| |||||||| || ||||||| Sbjct 203638 GACACGATCGACAACG-TCAAATCCAAGATCCAGGACAAGGAGGGAATCCCGCCCGACCA 203696 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || || || | || || || ||| |||| || | || || || | ||||||||| Sbjct 203697 ACAACGACTTATCTTTGCCGGTAAGCAGTTGGAGGATGGCCGAACGCTGAGCGACTACAA 203756 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 ||| || ||||| |||| ||||| Sbjct 203757 CATTCAGAAGGAGTCGACCCTGCA 203780 Score = 113 bits (124), Expect = 5e-20 Identities = 158/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || | ||||| || || || ||| |||| || || | || Sbjct 203806 ATGCAAATCTTTGTCAAGACATTGACGGGGAAGACAATTACCCTCGAAGTTGAATCTTCC 203865 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| || || ||||| | || | Sbjct 203866 GACACCATCGACAACG--TGAAGAGCAAGATTCAGGACAAGGAAGGCATTCCTCCTGATC 203923 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| || || |||||||| |||| ||||| || | |||||||| Sbjct 203924 AACAACGTCTCATCTTCGCTGGAAAGCAGCTGGAGGACGGTCGCACTCTGAGCGACTACA 203983 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | ||||| || ||||| || ||| Sbjct 203984 ACATCCAGAAGGAGTCTACGCTCCACTTGGTTCTCCGT 204021 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 38248 AAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA 38307 ||| | | ||||| || || || || || ||||||||| | || |||||| | |||||| Sbjct 203354 AAACAGTTGTAAAGACCCTTACCGGAAAGACCATCACCTTGGAGGTCGAGTCGTCCGACA 203413 Query 38308 GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGC 38367 | | | | | || || || | ||||| ||||| ||||| | ||||| |||| Sbjct 203414 CCATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGC 203473 Query 38368 GGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCC 38427 | | || | ||| ||||| ||||| || || | || ||||| |||||||||||||| Sbjct 203474 GATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTATCCGACTACAACATCC 203533 Query 38428 AAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | |||||| | || || || | || || ||| Sbjct 203534 AGAAGGAATCCACTCTTCACCTCGTCCTCCGT 203565 >seq737 Length=337091 Score = 105 bits (116), Expect = 7e-18 Identities = 141/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 38241 AAAATGCAA-ATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||| ||| | ||||| || || || ||||| || || |||||| |||| || ||| | Sbjct 284758 AAAATTCAATAGCTTCGTGAAGACCCTTACGGGTAAGACTATCACCCTCGAGGTGGAGTC 284699 Query 38300 CACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | | | || ||||| | ||||| ||||| || ||| |||| Sbjct 284698 TTCCGACACCATCGACAATGTCAAGTCCAAAATTCAGGACAAGGAGGGCATCCCCCCCGA 284639 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| || || | ||| ||||| || || || |||| || || || |||||| Sbjct 284638 CCAACAGCGTCTGATCTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCCGACTA 284579 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 284578 CAACATCCAGAAGGA 284564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168142140800