Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq116 480 1e-130 seq723 152 7e-32 seq698 122 1e-22 >seq116 Length=170512 Score = 480 bits (532), Expect = 1e-130 Identities = 1065/1590 (67%), Gaps = 23/1590 (1%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || || || ||||| || || || | ||| || |||||||| || || Sbjct 97457 TCATCCTCCTCCTTGTACTTCTCGGCCTCGGAAAGCATACGCTCGATGTCTTCCTTGGAC 97516 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | ||| || || | | |||| || || Sbjct 97517 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGACTTGCCGGTGCCCTTCTCGACA 97576 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || || |||| ||||| || ||||||| |||||| | || | |||||| || | Sbjct 97577 GCCGAGACGTTCATGATACCGTTGGCATCAAGATCGAAGGTGACCTCAATTTGAGGGACA 97636 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | ||||| | || || || || | || || | || |||| |||| ||| | Sbjct 97637 CCACGGGGTGCAGGCGGGATGCCAGTAAGCTCGAACTTGCCGAGTAGGTTGTTGTCCTTG 97696 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | ||| ||||| || ||||||| || ||| |||| || || || Sbjct 97697 GTGCGTTGACGCTCACCCTCGTAGACTTGGATAAGCACACCAGGCTGGTTGTCGGAGAAG 97756 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||||| | ||||| | || || || || || | || || | | |||| Sbjct 97757 GTGGAGAAGACCTCCGACTTCTTGGTGGGGATGGTGGTGTTGCGGGGGATGAGCTTGGTC 97816 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || |||||||| ||| |||| || |||||||| || | || || ||| | |||| Sbjct 97817 ATCATACCACCAGCAGTCTCGATACCGAGAGACAGCGGGGCGACATC---GAGAAGCAGG 97873 Query 6989 ---TC-TTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCC 7042 || ||| | || | | | |||| | | ||| ||||| ||||| | || Sbjct 97874 ATCTCGTTGGTCGACTTGGAGCTGGTGTCACCAGACAGGATAGCGGCCTGGACGGCAGCA 97933 Query 7043 CCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAA 7102 ||||| ||||| |||||||||||||| || | |||||| | || || ||||| || || Sbjct 97934 CCGTAGGCGACAGCCTCATCGGGGTTGATGGATTTATTGGGCTCCTTGCCGTTGAAGTAG 97993 Query 7103 TCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCA 7162 || | | | | || || ||||| || || || |||||||| | ||||| || Sbjct 97994 TCGGTGATGAGCTTCTGGATGCGGGGGATACGGGTGGAGCCACCGACAAGGACGATCTCG 98053 Query 7163 TTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACAT 7222 | || | || || |||||||| | ||| || |||||||| | || Sbjct 98054 TGGACCTGGGACTTGTCGATCTTGGCGTCAGCGAGGACGCGGTCGACAGGCTGGATGGTG 98113 Query 7223 TTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAA 7282 ||||| | |||| ||||| ||||| || | |||||||| |||||||| ||||| Sbjct 98114 GATCGGAAGAGGTCCTGGCACAGCTCCTCGAATCTAGCACGGGTGATGGATGTGTAGAAG 98173 Query 7283 TCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTT 7342 || | || ||| ||| || || || || || | || ||||| | ||||| | || Sbjct 98174 TCGATACCCTCGAATAGAGAGTCGATCTCGATAGAGGTCTGTGCAGAGGAAGAGAGGGTG 98233 Query 7343 CGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATA 7402 ||||| || |||||||| || ||||| | ||| || || ||||| | ||| ||| | Sbjct 98234 CGCTTGGCACGCTCACAGGCGGTTCGGAGACGGCGCAGAGCACGAGCGTTGGTGGACAGG 98293 Query 7403 TCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAA 7462 || ||||| || || || || ||||| | |||||| | |||| ||||| Sbjct 98294 TCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACTAGTCGGTTGTCGAAG 98353 Query 7463 TCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA 7522 || |||||||||||||| || || || ||||| | ||||| || |||||||| | || Sbjct 98354 TCCTCACCACCCAAGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCCTCCTCG 98413 Query 7523 ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTA 7582 ||| ||| | || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 98414 ATGGTTAGGAGAGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGCACGTTTCGC 98473 Query 7583 TCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATA 7642 || | || ||||| || |||||||| || || || || ||||| || || || || Sbjct 98474 TCACCCTCGGCCTTCTTGTCAAGACCGTAGGCAATGGCGGCAGCCGTGGGCTCGTTGATG 98533 Query 7643 ATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 || | || ||| ||||||||||||||| | || || || || |||||||| || || Sbjct 98534 ATTCTGAGGAC-GTTCAGGCCAGCAATGAGACCTGCGTCCTTGGTGGCTTGTCGCTGAGA 98592 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| ||||| |||||||| || | ||| |||| ||||| | ||| |||||||| Sbjct 98593 GTCGTTGAAGTAAGCCGGGACGGTGATGACGGCGTTAGTGACGGTACCACCTAGATACGA 98652 Query 7762 TTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTG 7821 || || | || ||||| ||||| || ||||| || || ||||| || | | || || Sbjct 98653 CTCGGCAGTCTCCTTCATCTTGGTCAGGACCATGGAGGAGATCTCCTCGGGGGTGAATTG 98712 Query 7822 TTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCACCGGGGAT 7878 ||| | || || || | ||||| || || || || || || | || || Sbjct 98713 CTTCTTCTCGCCCTTGTACTCAACCTCGATGATAGGCTTGCCATTCTTGTCA------AT 98766 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||||| | | | | ||||| ||| | || || | |||| || ||||||| || Sbjct 98767 GACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGTACTTCGGGGTCGGAGAACTTTCGGCC 98826 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 || |||||||| || || || || ||||| | |||||||||||| |||||||| || Sbjct 98827 AATCAGACGCTTAGCGTCGAAGACGGTGTTGTGGGGGTTCATGGCGACCTGGTTCTTGGC 98886 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 || || ||||| || || || | ||||| || || ||| | || ||||| || || Sbjct 98887 GGCATCACCGATCAGTCGCTC---CGTGTCCGTGAAGGCCACGAAGGACGGGGTGGTCCG 98943 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 || || ||||| || ||||| ||||| | ||||| | | | ||||||| || ||||| Sbjct 98944 GTTACCCTGGTCATTGGCAATGATTTCGATTCGGTCATCTCGGAAGACGCCTACACACGA 99003 Query 8119 ATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || ||||| |||| ||| Sbjct 99004 GTAGGTCGTGCCCAAGTCAATTCCGACTGC 99033 >seq723 Length=1045888 Score = 152 bits (168), Expect = 7e-32 Identities = 364/545 (67%), Gaps = 13/545 (2%) Strand=Plus/Plus Query 7243 CAGTTCCTCAAAACGTGCACGGGTAAT--GGATGTATAGAAATCAACGCCGTCGTATAAC 7300 ||| ||||| ||||| |||||||| || ||| | | |||||| |||| || | | | Sbjct 639207 CAGGTCCTCGAAACGAGCACGGGTGATTTGGAGGAA--GAAATCCTCGCCATCAAAAAGC 639264 Query 7301 GAATCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCAC 7358 || ||||| || ||||| || || || ||| | ||| |||| ||| || ||||| | Sbjct 639265 GAGTCAATCTCGATGGTGGTCTGGGCACCGTTGGAGAGG--GTTCTCTTGGCACGCTCGC 639322 Query 7359 ACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTAC 7418 | || ||||| | | || || || ||||||| || || || || || || || | Sbjct 639323 AAGCAGTTCGGAGTCTTCGGAGAGCTCGCGGGTCGCCAGAGATGTCCTTTTTGGTCTTGC 639382 Query 7419 GTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGT 7478 | | ||||| | | |||| ||| || | | ||||||||||| |||||| | | Sbjct 639383 GCTGGAACTCCTTCTTGCAGTGCTCAAGAAGGTTGGTATCGAAATCTTGACCACCAAGAT 639442 Query 7479 GTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAA 7538 | ||||| || ||||| || || || ||||| ||| || | ||| | | | || | Sbjct 639443 GGGTATCACCGGCGGTGGCCTTAACAGTAAAGACACCACCCTGGATGGTAAGGAGGGACA 639502 Query 7539 CATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT----TTG 7594 |||| || || |||||||| || || | ||||| || || || | | || ||| Sbjct 639503 CATCGAAAGTGCCACCACCAAGATCGTAGATGAGCACATTGCGCTCCTTG-CTGGACTTG 639561 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || | | ||| || |||||||| || || || || || ||||| ||||| || | Sbjct 639562 TTGGAGCCCAAACCATAGGCGATAGCAGCGGCAGTGGGCTCGTTAATGATACGGAGCACG 639621 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 ||||| || | || | | || || || || ||||| ||||| ||||| |||||| Sbjct 639622 TTCAGCCCCGAGATGGAACCAGCGTCCTTGGTGGCTTGACGTTGGTTGTCGTTGAAGTAG 639681 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || || || || | ||| || | || ||||| ||||| | | || ||||| || Sbjct 639682 GCAGGCACGGTGATGACAGCCTTTTCAACCTTCTTGCCGAGCTTGGTCTCGGCGATCTCC 639741 Query 7775 TTCAT 7779 ||||| Sbjct 639742 TTCAT 639746 >seq698 Length=460427 Score = 122 bits (134), Expect = 1e-22 Identities = 228/329 (69%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | ||| || || || ||||| || |||||| || | ||| Sbjct 41177 TCGAAATCTTCACCACCAAGGTGGGTGTCACCAGCGGTAGCCAAGACTTCGAATACACCA 41118 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || ||||||||||| || || | | || | | Sbjct 41117 TCCTCAATGGACAGAAGAGAGACATCGAAAGTACCACCACCAAGATCGTAGACGATAATG 41058 Query 7577 T-TCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | ||| || || | | |||| || | |||||| ||||| || || || || || || Sbjct 41057 TGGCGT-TCACCGCC---GGTCTTGTCCAAACCGTAGGCGATGGCAGCGGCAGTAGGCTC 41002 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694 || | |||||| || ||| || || || || | |||| || || || || ||||||| Sbjct 41001 GTTGACAATACGCAGCACGTTAAGACCGGCGAT-GATGCCAGCGTCCTTGGTGGCTTGTC 40943 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 || || || || ||||| ||||| || ||||| |||| || || ||||| || | Sbjct 40942 TCTGGTTGTCATTGAAATAGGCGGGGACAGTAACGACGGCGTGGGTAACCTTCTTGCCCA 40883 Query 7755 GATACGATTCCGCGATATCTTTCATTTTG 7783 || || || |||| || ||||| ||| Sbjct 40882 AGTAGGACTCGGCGACCTCCTTCATCTTG 40854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635126885325800