Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq434 167 3e-36 seq334 105 8e-18 seq346 102 1e-16 >seq434 Length=564148 Score = 167 bits (184), Expect = 3e-36 Identities = 999/1577 (63%), Gaps = 73/1577 (5%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||| || ||||| || |||||| |||||| ||||| ||||| | || | || Sbjct 553362 GTTCAGCGATTGGGACTGGTCAATGAATGCACCACGGTCAGCGGCCATCTGGACAA--CA 553305 Query 109560 CTTT--TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCC 109617 || || |||||||| || |||||||| | | ||| ||||| | || ||| Sbjct 553304 GTTCGCTGAGAGATTTCCCAAACGGTCTTGTAGAGAGCCTTTATATCGGCAGGGRTGTTA 553245 Query 109618 ACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTC-G 109672 ||||| ||||| || || ||| ||| || ||| | | |||||| || || | Sbjct 553244 GGAATGTTCTGAATCGAACC----GCCCTCAGCAATGATACGGTTCTTCATG-CTATCAG 553190 Query 109673 ACCAGAGACCGACCTTTTTGAGATC-----GTCAACAAGATGCTTGTTGACCACGACAAA 109727 |||||||||| | | ||||| || | |||| |||||| || || Sbjct 553189 ACCAGAGACCCATATCAACAAGATCCTTGAGTAACCAAGG-----GTTGACAACCTGGAA 553135 Query 109728 TTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATT 109787 ||| |||||||| || ||| ||||| || | ||||| || ||||| || ||||| Sbjct 553134 TTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAGGTGTAAGGCTCGAAGCATTCATT 553075 Query 109788 GTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCG 109847 ||| || ||||| || | ||| ||||| |||||||| || | | | ||||| || Sbjct 553074 GTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATGGGGGCGACCAACAAGCTGTTGCG 553015 Query 109848 GAGACCCTTCGTCTTTACCCGCTC----ACGCATTGC--GTCCCAATCATAACGACCACT 109901 | ||| | ||| | ||| | || | | |||||| || |||| Sbjct 553014 TACACCAGTTTGCTTAATTTTCTCCTTTAGGCTTGTCCAGTCCCAGAGATC-CGACG--- 552959 Query 109902 AAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACC 109961 | | || || |||||| || |||||| | ||||| | |||||||||| Sbjct 552958 -------GGGTGAC-ATTCCACATGTCGTATTGAAGGATACCCTGCGAGACAGGAGAACC 552907 Query 109962 CTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCG 110020 | | | ||| | || ||||||| ||| | || || || || || || || | Sbjct 552906 TTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAATATCCGAAGACGCAGTCAAG-GCGG 552848 Query 110021 CATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGG 110080 |||| || || ||||| || || || |||| | | | |||| | ||||| | Sbjct 552847 CATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTGGCCTCTGGTGACTCGAAAG 552788 Query 110081 GAAGAC----CACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGG 110136 | | | | | | |||| | || || |||||||||||||| ||||||||||| Sbjct 552787 GCATGCGCAGCGCCAGGAATGTA----TCAGCAAGACCCTGAACACCAAGACCAATGGGA 552732 Query 110137 CGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACC 110196 || || |||||| | || || | |||||||| ||||| ||| |||| Sbjct 552731 CGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAGTAGTTGACGTCAATGATT 552672 Query 110197 CGATTGAGATTCTTCGTCACAGTCTTC-GTGATTTCATGGAGTTTGTCGTAATCGAACGT 110255 | || || || | || | ||| || | ||||| | || | | | || | || Sbjct 552671 CTGTTCAGGTTGTGAACGAC-GACTTGAGTAACCTCATGCAACTTCTGGAAGTCATAGGT 552613 Query 110256 TTTCGTCTCCTTATTGACAT---ATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGA 110312 | | || |||| | || || || | |||| || || | ||||| |||| Sbjct 552612 TCCC---TCGTTATAGTCAACGAATGACGGCAACGCAAGGGAAGCCAAGTTGCAAACAGC 552556 Query 110313 AGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGAC 110372 |||||| | | | ||| || | || || || || | ||| || || ||| Sbjct 552555 CACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTCGAGCTGCGAATAGT 552496 Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 ||| | ||||||||| || ||| |||||| |||||| || |||||| | ||| | Sbjct 552495 ACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAAGGGGTT 552436 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTG 110491 ||||| || ||||| | | ||||||||| | ||| | | || | | | | || Sbjct 552435 TCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGAGCCTTAATC--TTC 552378 Query 110492 CGTTAGCGA-GACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTAC 110550 | || | |||| || | |||||||| ||||| | ||||||| || | || || Sbjct 552377 TGGCGGCCACGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAAACTCGTCGCCATAG 552318 Query 110551 ACATCAGAAAGACCCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTC 110609 ||||| | || || || || || ||| || | ||||| ||| | ||| || ||| Sbjct 552317 ACATCGGCTAGGCCAGG-GCATTCGTTGGGGCACATGAGGGTCCACTCGCCATTCTTCTC 552259 Query 110610 AACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGC 110669 || | ||||||||| ||||| |||||||| | ||| |||||| |||||| ||| | Sbjct 552258 GACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGAC 552199 Query 110670 CTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGG 110729 ||||| | || ||||| || || |||| || || | | |||||||||||| || Sbjct 552198 TTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGG 552139 Query 110730 TTCGAGATAGACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTG 110785 |||||||||| || | | || || | | || |||||| || || | | Sbjct 552138 CTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTG-CCACCCTGGTCTACGTATCTAG 552080 Query 110786 CTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCC 110845 | ||| ||||||||| | |||||| || | ||| || | || || || || || Sbjct 552079 CAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGG 552020 Query 110846 TAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACT 110905 ||| || | || |||||| |||||| | | |||||||||||| ||| || Sbjct 552019 CAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACCGGCCATCT 551960 Query 110906 TACTAATTTGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTG 110964 | || || || ||| | || || | || ||||| ||||| || |||| Sbjct 551959 TGGAGATCATGGCGCAGGTCT-TAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTC 551901 Query 110965 TTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTA 111024 || ||| || ||||| || || | ||||| | || ||||| ||||||||||| || Sbjct 551900 ATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTT 551841 Query 111025 GGTGTCGCATGAATGAA 111041 || | ||||| |||| Sbjct 551840 GGGGAGGCATGGGTGAA 551824 >seq334 Length=652976 Score = 105 bits (116), Expect = 8e-18 Identities = 336/510 (66%), Gaps = 12/510 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || || || || ||||||||||| ||| |||| || || |||||||| || Sbjct 128909 TGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACCA 128850 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| || || |||||||||||||| || | Sbjct 128849 CGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGCG 128790 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGT---CGAACCACTTGAGAGC 119683 || || |||| | ||||| || ||||| || ||||| ||| ||| | || || Sbjct 128789 GCAAAGGCGATCAAACGCTGGGC-GAAGGTGGACTTCTTGTCAGCGATCCAGTGCAGGGC 128731 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT 119743 ||||| ||||| | ||||| |||| || | |||||| | ||| || || |||| Sbjct 128730 CCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGTCTT 128671 Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT 119803 | || ||||| || ||| | |||||||| |||||||||||| || | | Sbjct 128670 CTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGATGTT 128611 Query 119804 -TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAG 119862 | ||| || ||| | | || || | || || |||| ||| || || ||| ||| Sbjct 128610 CTCCATCATG-ATCTGGAAACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTCGCCAG 128552 Query 119863 CAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAG 119921 | ||| | | | | || || ||||| || |||||| | ||||| || || | | Sbjct 128551 -AGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGGCAAGG 128493 Query 119922 ATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCCAGTCGTCCATATCT 119978 |||| ||||| || |||| |||||| || ||| ||||||||| | ||| Sbjct 128492 ATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGAGATCC 128433 Query 119979 TTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 || || | || | ||| ||||| |||||| Sbjct 128432 TTGGAGAGATCAATCTCCTCAGCGGTCCAG 128403 >seq346 Length=435437 Score = 102 bits (112), Expect = 1e-16 Identities = 276/414 (67%), Gaps = 15/414 (4%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT------ 11645 ||| |||||||| || || || | |||||||| || ||| ||||||||||| Sbjct 128437 GAAGCCGTCCATCTCCGTAAGGATCTGGTTGAGAGTAGCTTCTCGCTCATCGTTACCCCC 128378 Query 11646 GGAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATAC 11705 | | || || || ||| ||| |||||| || ||||| || || || || | Sbjct 128377 GAATCGCTGGCC--CT-CCGCACGAGATCTACCGATGGCATCAATTTCGTCAATAAAAAT 128321 Query 11706 GATACACGGTTGGTTGGCACGTGCCTGTT-CGAAAAGTTCACGTACACGCTTCGCTCCAA 11764 ||||| || ||| ||||| ||| ||||||| || | || | || |||| Sbjct 128320 AATACATGGCGTGTTTTTCCGTGC-TGTGGCGAAAAGATCCCTGACTCTGGATGCACCAA 128262 Query 11765 CACCTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGA 11822 |||| |||||||| || ||||| | || | || | | || || ||| || || || Sbjct 128261 CACCAACGAACATTTCGACGAACTCTGAACCGCTTA-CGCTAAA-GAACGGCACTCCCGA 128204 Query 11823 CTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAG 11882 ||||||||| ||||| || || | ||||||||||| || |||| |||||||||| Sbjct 128203 TTCACCAGCGGTGGCTTTCGCAAGTAACGTCTTACCCGTTCCCGGTGGTCCAGCGAGAAT 128144 Query 11883 GGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTC 11942 || || || || ||||| |||||| || | | || |||||||||||||| Sbjct 128143 TGCACCGCGCGGTATCTTTGCACCAAGTCTCTGAAACCTGTCCGGCTTCTTGAGGAAACT 128084 Query 11943 CACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || | |||| || || | |||||| ||| ||||| |||| || | ||| Sbjct 128083 AACGAACTCCATAATCTCTTGCTTGGCTTCGTCCATACCAGCAACGTCTGAGAA 128030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970515161000