Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq434 181 1e-40 seq334 109 6e-19 >seq434 Length=564148 Score = 181 bits (200), Expect = 1e-40 Identities = 1107/1749 (63%), Gaps = 51/1749 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGC-GTACATATGCATAGAAGA 105648 || || |||||||| || ||||| ||||| | ||||| | ||| | ||||||| | Sbjct 553454 CGAAGGTAGTACATGCCAGTCTTCAGTCCGAGCTTCCAACCAGTAAA-ATGCATACTGGT 553396 Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708 | |||| ||| || || | |||| | |||| ||| |||||||||||| Sbjct 553395 AATCTTGCCCATAGTGGGTTCTCTCATGTGGATGTTCAGCGATTGGGACTGGTCAATGAA 553336 Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTGATTTCCCACACTGTG 105766 |||||| | || ||||| | | ||| || | | ||||||||| || || Sbjct 553335 TGCACCACGGTCAGCGGCCATCTGGACAACAGTTCGCTGAGA--GATTTCCCAAACGGTC 553278 Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826 ||||||| ||| ||||| | ||| | | | || || ||||| ||||| ||| | Sbjct 553277 TTGTAGAGAGCCTTTATATCGGCAGGGRTGTTAGGAATGTTCTGAATCGAACCGCCCTCA 553218 Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886 | || | | |||||| | ||||| ||||| || | ||||| |||| Sbjct 553217 GCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATATCAACAAGATCCTTGAGT 553158 Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946 | |||||||| | || || || || ||| | | |||||| |||| Sbjct 553157 AACCAAGGGTTGACAACCTGGAATTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAG 553098 Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| || || ||||||||||| ||||||| ||| || | || |||||| ||||| Sbjct 553097 GTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATG 553038 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || || | ||| | ||||| || | ||| ||| ||| || ||||| || | Sbjct 553037 GGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTCCTTTAGGCTTGTC 552978 Query 106067 CAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124 ||||| || || | || | || |||| |||| || ||||||| | || || | Sbjct 552977 CAGTCCCAGA-GATCCGACGGGGTGACATTCC-ACATGTCGTATTGAAGGATACCCTGCG 552920 Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184 | |||||||| ||| | || || | || | | | || | || | || Sbjct 552919 AGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAATATCCGAAGACG 552860 Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244 | || || || || || || || || ||||| | |||| || | |||| || Sbjct 552859 CAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTGGCCTCTG 552800 Query 106245 CTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299 ||| || || |||| |||| || || | ||| || ||||| |||||||| Sbjct 552799 GTGACTCGAAAGGCATGCGCAGCGCCAGGAA-----TGTATCAGCAAGACCCTGAACACC 552745 Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAAT 106358 | |||||| || | ||||||||| || || || || ||| ||||| || | | Sbjct 552744 AAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACGGGGTAGTAGT 552686 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | |||||||| || ||| || || | || | | || | ||||| | || | Sbjct 552685 TGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCATGCAACTTCT 552626 Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATGCC 106474 | ||| | || | ||| | || | || || || || || | || ||| Sbjct 552625 GGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAACGCAAGGGAAGCC 552570 Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534 || |||||||||||| ||| || | | |||||| | || || || || | ||| Sbjct 552569 AAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTC 552510 Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594 || || ||| || || | ||||| ||||| ||||| |||||| ||||||||| Sbjct 552509 GAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAA 552450 Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGC 106653 |||||| |||| | || ||||| ||||| | | |||||| || | ||||| | || | Sbjct 552449 AGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGA 552390 Query 106654 GGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 | | | | ||||| | | || ||||| || |||||||| ||| ||||| |||| Sbjct 552389 GCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAA 552332 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCAT 106771 |||| || || | |||| || || || || || || || || | || | ||| Sbjct 552331 ACTCGTCGCCATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAC 552273 Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGA 106829 | ||| || ||| || ||||||||||| ||||| |||||||| || | | |||| | Sbjct 552272 TCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA--A 552215 Query 106830 GATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888 |||| | ||| || | ||||| | || ||||| ||| | || |||||||| | Sbjct 552214 GATCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156 Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 106944 | ||||| |||||| ||||| ||||||| || | || || || | | | ||| | Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTG-CCACC 552097 Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004 || | ||| || | || ||| || || || || ||||| || | |||||| | || Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037 Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064 || || || || ||| || | || | | ||||||| | || Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977 Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124 |||||| || ||| ||| ||||| || || | |||| || | |||||||| | Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917 Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 107184 || ||| ||||| || | | |||||||| || | ||| | ||||| || Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCC 551857 Query 107185 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTAT 107242 |||||||||||| ||||| | || || |||| || ||| |||||| || || Sbjct 551856 AGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA-GTA-TTTGCTGGACATGAGGTTATAG 551799 Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302 |||| | || || | || || || |||||||| ||||||||||| | |||| Sbjct 551798 GTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGACAGCCACACGCATGATCATG 551739 Query 107303 TATTGGGGT 107311 | || ||| Sbjct 551738 TGCTGCGGT 551730 >seq334 Length=652976 Score = 109 bits (120), Expect = 6e-19 Identities = 337/514 (66%), Gaps = 17/514 (3%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || || || || || || |||||| ||||| ||||||||||| Sbjct 128910 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACC 128851 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | ||| | ||| ||||||||| ||||| || Sbjct 128850 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGC 128791 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461 ||||| || | | |||| |||||||| | ||||| ||||| | ||| | || Sbjct 128790 GGCAAAGGCGATCAAACGCTGGGCGAAGGTG---GACTTCTTGTCAGCGATCCAGTGCAG 128734 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 117521 ||||| | ||||||| | || || || | || | |||||| | || | || | Sbjct 128733 GGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGT 128674 Query 117522 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 117581 ||| | | ||||| |||||| ||||||| | || || || ||| || | Sbjct 128673 CTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGAT 128614 Query 117582 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCAT 117640 | | ||| ||| | || | ||||||| | ||||| ||| ||||| || || Sbjct 128613 GTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTC-G 128556 Query 117641 CCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATG 117697 || | ||| | | || | ||||| ||||| || ||||| | || || || | Sbjct 128555 CCAGAGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGG 128498 Query 117698 CCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAA 117754 | ||||||| ||||| ||| |||| || || | || | ||||||||| | Sbjct 128497 CAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGA 128438 Query 117755 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 |||| ||||| | ||||| || || || ||||| Sbjct 128437 GATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589975305803800