Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq434 181 1e-40
seq334 109 6e-19
>seq434
Length=564148
Score = 181 bits (200), Expect = 1e-40
Identities = 1107/1749 (63%), Gaps = 51/1749 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGC-GTACATATGCATAGAAGA 105648
|| || |||||||| || ||||| ||||| | ||||| | ||| | ||||||| |
Sbjct 553454 CGAAGGTAGTACATGCCAGTCTTCAGTCCGAGCTTCCAACCAGTAAA-ATGCATACTGGT 553396
Query 105649 GAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAA 105708
| |||| ||| || || | |||| | |||| ||| ||||||||||||
Sbjct 553395 AATCTTGCCCATAGTGGGTTCTCTCATGTGGATGTTCAGCGATTGGGACTGGTCAATGAA 553336
Query 105709 GCGACCACGTTGTGCCGCCATATCAATGACA--TCCTTCATCTTGATTTCCCACACTGTG 105766
|||||| | || ||||| | | ||| || | | ||||||||| || ||
Sbjct 553335 TGCACCACGGTCAGCGGCCATCTGGACAACAGTTCGCTGAGA--GATTTCCCAAACGGTC 553278
Query 105767 CGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCC 105826
||||||| ||| ||||| | ||| | | | || || ||||| ||||| ||| |
Sbjct 553277 TTGTAGAGAGCCTTTATATCGGCAGGGRTGTTAGGAATGTTCTGAATCGAACCGCCCTCA 553218
Query 105827 TTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACG 105886
| || | | |||||| | ||||| ||||| || | ||||| ||||
Sbjct 553217 GCAATGATACGGTTCTTCATGCTATCAGACCAGAGACCCATATCAACAAGATCCTTGAGT 553158
Query 105887 AGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTC 105946
| |||||||| | || || || || ||| | | |||||| ||||
Sbjct 553157 AACCAAGGGTTGACAACCTGGAATTCGCCAGCAAGGACACGGCGGGAATAGATATTCGAG 553098
Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006
||||| || || ||||||||||| ||||||| ||| || | || |||||| |||||
Sbjct 553097 GTGTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATG 553038
Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066
|| || | ||| | ||||| || | ||| ||| ||| || ||||| || |
Sbjct 553037 GGGGCGACCAACAAGCTGTTGCGTACACCAGTTTGCTTAATTTTCTCCTTTAGGCTTGTC 552978
Query 106067 CAGTCGTAGTTGAGCTT--GGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGG 106124
||||| || || | || | || |||| |||| || ||||||| | || || |
Sbjct 552977 CAGTCCCAGA-GATCCGACGGGGTGACATTCC-ACATGTCGTATTGAAGGATACCCTGCG 552920
Query 106125 ACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCG 106184
| |||||||| ||| | || || | || | | | || | || | ||
Sbjct 552919 AGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAATATCCGAAGACG 552860
Query 106185 CCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCAT 106244
| || || || || || || || || ||||| | |||| || | |||| ||
Sbjct 552859 CAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTGGCCTCTG 552800
Query 106245 CTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACC 106299
||| || || |||| |||| || || | ||| || ||||| ||||||||
Sbjct 552799 GTGACTCGAAAGGCATGCGCAGCGCCAGGAA-----TGTATCAGCAAGACCCTGAACACC 552745
Query 106300 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACGGGATAAAAAT 106358
| |||||| || | ||||||||| || || || || ||| ||||| || | |
Sbjct 552744 AAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCC-TCTGGGACGGGGTAGTAGT 552686
Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418
| |||||||| || ||| || || | || | | || | ||||| | || |
Sbjct 552685 TGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCATGCAACTTCT 552626
Query 106419 CATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG----GCGATTGATGCC 106474
| ||| | || | ||| | || | || || || || || | || |||
Sbjct 552625 GGAAGTCATAGGTTCC---CTCGTTATAGTCA-ACGAATGACGGCAACGCAAGGGAAGCC 552570
Query 106475 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTG 106534
|| |||||||||||| ||| || | | |||||| | || || || || | |||
Sbjct 552569 AAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCAGAGGTTC 552510
Query 106535 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAG 106594
|| || ||| || || | ||||| ||||| ||||| |||||| |||||||||
Sbjct 552509 GAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAA 552450
Query 106595 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGC 106653
|||||| |||| | || ||||| ||||| | | |||||| || | ||||| | || |
Sbjct 552449 AGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCATACCACAGCTTCTGA 552390
Query 106654 GGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712
| | | | ||||| | | || ||||| || |||||||| ||| ||||| ||||
Sbjct 552389 GCCTTAATCTTCTGGCG--GCCACGACCCTCTGCTTCGTACTTCTCGTACAGGGCCTCAA 552332
Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCAT 106771
|||| || || | |||| || || || || || || || || | || | |||
Sbjct 552331 ACTCGTCGCCATAGACATCGGCTAGGCCAGG-GCATTCGTTGGGGCACATGAGGGTCCAC 552273
Query 106772 TGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG--ATGAAAAGA 106829
| ||| || ||| || ||||||||||| ||||| |||||||| || | | |||| |
Sbjct 552272 TCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAAA--A 552215
Query 106830 GATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATG 106888
|||| | ||| || | ||||| | || ||||| ||| | || |||||||| |
Sbjct 552214 GATCACGGGCACGGA-CTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAA 552156
Query 106889 ATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGC 106944
| ||||| |||||| ||||| ||||||| || | || || || | | | ||| |
Sbjct 552155 ACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTG-CCACC 552097
Query 106945 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 107004
|| | ||| || | || ||| || || || || ||||| || | |||||| | ||
Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037
Query 107005 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 107064
|| || || || ||| || | || | | ||||||| | ||
Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977
Query 107065 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 107124
|||||| || ||| ||| ||||| || || | |||| || | |||||||| |
Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 107125 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 107184
|| ||| ||||| || | | |||||||| || | ||| | ||||| ||
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCC 551857
Query 107185 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTAT 107242
|||||||||||| ||||| | || || |||| || ||| |||||| || ||
Sbjct 551856 AGCATTGAAGAGAGTTGGGGAGGCATGGGTGAA-GTA-TTTGCTGGACATGAGGTTATAG 551799
Query 107243 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATG 107302
|||| | || || | || || || |||||||| ||||||||||| | ||||
Sbjct 551798 GTCTGTATAACCTTCTCCACATCATCACCCCAGATGCCGACAGCCACACGCATGATCATG 551739
Query 107303 TATTGGGGT 107311
| || |||
Sbjct 551738 TGCTGCGGT 551730
>seq334
Length=652976
Score = 109 bits (120), Expect = 6e-19
Identities = 337/514 (66%), Gaps = 17/514 (3%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||||||||| || || || || || || || |||||| ||||| |||||||||||
Sbjct 128910 GTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACC 128851
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | | ||| | ||| ||||||||| ||||| ||
Sbjct 128850 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGC 128791
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461
||||| || | | |||| |||||||| | ||||| ||||| | ||| | ||
Sbjct 128790 GGCAAAGGCGATCAAACGCTGGGCGAAGGTG---GACTTCTTGTCAGCGATCCAGTGCAG 128734
Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTT 117521
||||| | ||||||| | || || || | || | |||||| | || | || |
Sbjct 128733 GGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGT 128674
Query 117522 CTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAAC 117581
||| | | ||||| |||||| ||||||| | || || || ||| || |
Sbjct 128673 CTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTCGGAGTGGAT 128614
Query 117582 CAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCAT 117640
| | ||| ||| | || | ||||||| | ||||| ||| ||||| || ||
Sbjct 128613 GTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGCGCCTCGGGAATCTGGACCTC-G 128556
Query 117641 CCGCAAAATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATG 117697
|| | ||| | | || | ||||| ||||| || ||||| | || || || |
Sbjct 128555 CCAGAGAATCG--CTCGACAAGGTTCTCGTTGACAATGCCGTCGGATGCGGCGAAAAAGG 128498
Query 117698 CCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAA 117754
| ||||||| ||||| ||| |||| || || | || | ||||||||| |
Sbjct 128497 CAAGGATGTGGGAGATGAAGAACTTCTCATCATCGTTTAGGCGGTTGCTCCAGTCGTGGA 128438
Query 117755 GATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
|||| ||||| | ||||| || || || |||||
Sbjct 128437 GATCCTTGGAGAGATCAATCTCCTCAGCGGTCCA 128404
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589975305803800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |