Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq501 93.3 5e-14 >seq501 Length=313222 Score = 93.3 bits (102), Expect = 5e-14 Identities = 182/269 (68%), Gaps = 0/269 (0%) Strand=Plus/Plus Query 153747 GATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCAT 153806 |||||||| | || || |||||| || ||| | || |||||| ||||| || || Sbjct 244890 GATATTGCATTTGGAAGCGCGCAAAGATTCGGTGTACCATTGGGATTCGGAGGCCCCCAC 244949 Query 153807 GCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGT 153866 || || ||||| || || ||| | ||||||||||| || || || | || || Sbjct 244950 GCCGCCTTCTTCGCCGTTCAGGAGAAGCACAAGAGAAAGATGCCCGGGCGATTAGTTGGC 245009 Query 153867 CAGTCAGTAGATAGTGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAG 153926 | || ||| | ||| |||||| ||| || |||| |||||||| |||| ||| Sbjct 245010 CTTTCTAAGGATCGACTAGGCGGTAAAGCGTACCGACTAGCCCTACAGACCCGAGAACAG 245069 Query 153927 CATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986 || || | ||||| || || || || || |||| || | |||||| || |||| ||| Sbjct 245070 CACATTCGAAGAGAGAAGGCGACTAGCAATGTCTGTACGTCGCAGGCATTGTTGGCAAAT 245129 Query 153987 ATGTCTGGATTCTATGCAGCATATCATGG 154015 ||| | |||||||| || ||||| Sbjct 245130 ATGAACGCTCTCTATGCAATCTACCATGG 245158 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 153210 GGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTGAGAAT 153269 || ||||||||||||||||| ||| || | ||||| || || ||||| || ||||| Sbjct 244323 GGCCAAGGATACTATGGAACACATACGCCTGCTGTCATTCAACGGAACGTGCTCGAGAAC 244382 Query 153270 CCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAA 153329 || ||||||||| || || || || || | || || ||||| ||||||| Sbjct 244383 CCCGCTTGGTACACGAGCTATACCCCTTACCAGCCAGAAATCAGCCAGGGCCGATTGGAG 244442 Query 153330 GCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAAACGCA 153389 | ||| |||| | ||| || | | || || ||||||| | || ||||| || || Sbjct 244443 TCCTTACTCAACTTCCAGACCATGGTTACGGACCTTACAGCCCTTCCCATAGCCAATGCC 244502 Query 153390 TCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| |||| |||| ||||| || || ||||| ||| Sbjct 244503 AGTCTTCTAGACGAAGGTACTGCTGCTGCCGAAGCTATG 244541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579207406080800