Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq501 93.3 5e-14 >seq501 Length=313222 Score = 93.3 bits (102), Expect = 5e-14 Identities = 170/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 158442 GCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 158501 |||||| || ||| | || |||||| |||||| || || || || ||||| || Sbjct 244910 GCAAAGATTCGGTGTACCATTGGGATTCGGAGGCCCCCACGCCGCCTTCTTCGCCGTTCA 244969 Query 158502 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGG 158561 || ||| | ||||||||||| || || || | || || | || ||| | ||| Sbjct 244970 GGAGAAGCACAAGAGAAAGATGCCCGGGCGATTAGTTGGCCTTTCTAAGGATCGACTAGG 245029 Query 158562 TAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621 |||||| ||| || |||| |||||||| |||| ||||| || ||||||| || || Sbjct 245030 CGGTAAAGCGTACCGACTAGCCCTACAGACCCGAGAACAGCACATTCGAAGAGAGAAGGC 245089 Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681 || || || |||| || | || ||| || |||| |||||| | |||||||| Sbjct 245090 GACTAGCAATGTCTGTACGTCGCAGGCATTGTTGGCAAATATGAACGCTCTCTATGCAAT 245149 Query 158682 ATATCATGG 158690 || ||||| Sbjct 245150 CTACCATGG 245158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 157885 GGTCAAGGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAA 157943 || ||||||||||||||||| ||| || || | ||||| || || ||||| || ||||| Sbjct 244323 GGCCAAGGATACTATGGAACACAT-ACGCCTGCTGTCATTCAACGGAACGTGCTCGAGAA 244381 Query 157944 TCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA 158003 || ||||||||| || || || || || | || || ||||| ||||||| Sbjct 244382 CCCCGCTTGGTACACGAGCTATACCCCTTACCAGCCAGAAATCAGCCAGGGCCGATTGGA 244441 Query 158004 AGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGC 158063 | ||| |||| | ||| || | | || || || |||| || || ||||| || || Sbjct 244442 GTCCTTACTCAACTTCCAGACCATGGTTACGGACCTTACAGCCCTTCCCATAGCCAATGC 244501 Query 158064 ATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 ||| |||| |||| ||||| || || ||||| ||| Sbjct 244502 CAGTCTTCTAGACGAAGGTACTGCTGCTGCCGAAGCTATG 244541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588045723773200