Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq501 93.3 5e-14
>seq501
Length=313222
Score = 93.3 bits (102), Expect = 5e-14
Identities = 170/249 (68%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 158442 GCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAAC 158501
|||||| || ||| | || |||||| |||||| || || || || ||||| ||
Sbjct 244910 GCAAAGATTCGGTGTACCATTGGGATTCGGAGGCCCCCACGCCGCCTTCTTCGCCGTTCA 244969
Query 158502 AGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGG 158561
|| ||| | ||||||||||| || || || | || || | || ||| | |||
Sbjct 244970 GGAGAAGCACAAGAGAAAGATGCCCGGGCGATTAGTTGGCCTTTCTAAGGATCGACTAGG 245029
Query 158562 TAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGC 158621
|||||| ||| || |||| |||||||| |||| ||||| || ||||||| || ||
Sbjct 245030 CGGTAAAGCGTACCGACTAGCCCTACAGACCCGAGAACAGCACATTCGAAGAGAGAAGGC 245089
Query 158622 AACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGC 158681
|| || || |||| || | || ||| || |||| |||||| | ||||||||
Sbjct 245090 GACTAGCAATGTCTGTACGTCGCAGGCATTGTTGGCAAATATGAACGCTCTCTATGCAAT 245149
Query 158682 ATATCATGG 158690
|| |||||
Sbjct 245150 CTACCATGG 245158
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 157885 GGTCAAGGATACTATGGAAC-CATCACACCCCCAGTCATACAGCGAAACGTTCTTGAGAA 157943
|| ||||||||||||||||| ||| || || | ||||| || || ||||| || |||||
Sbjct 244323 GGCCAAGGATACTATGGAACACAT-ACGCCTGCTGTCATTCAACGGAACGTGCTCGAGAA 244381
Query 157944 TCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGATTGGA 158003
|| ||||||||| || || || || || | || || ||||| |||||||
Sbjct 244382 CCCCGCTTGGTACACGAGCTATACCCCTTACCAGCCAGAAATCAGCCAGGGCCGATTGGA 244441
Query 158004 AGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAAACGC 158063
| ||| |||| | ||| || | | || || || |||| || || ||||| || ||
Sbjct 244442 GTCCTTACTCAACTTCCAGACCATGGTTACGGACCTTACAGCCCTTCCCATAGCCAATGC 244501
Query 158064 ATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103
||| |||| |||| ||||| || || ||||| |||
Sbjct 244502 CAGTCTTCTAGACGAAGGTACTGCTGCTGCCGAAGCTATG 244541
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588045723773200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |