Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq698 159 8e-34 seq737 154 3e-32 >seq698 Length=460427 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| | ||||||||| || || ||||| || ||||| ||||| ||| || |||| Sbjct 203795 AGTCGGAGAACAAGGTGCAGGGTCGACTCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGG 203736 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || | ||||||||| || |||||||||||||||||||| || || || || || Sbjct 203735 CCATCCTCCAACTGCTTACCGGCAAAGATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCC 203676 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || |||||||| || || ||||||||| ||||| |||||||| Sbjct 203675 TTGTCCTGGATCTTGGATTTGACGTTGTCGATCGTGTCCGAAGACTCCACCTCAAGGGTG 203616 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||| || ||||| | |||||| Sbjct 203615 ATTGTCTTGCCAGTGAGAGTCTTCACGAATATTTGCAT 203578 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || || ||||| || || || ||||| ||| ||||| | || || || Sbjct 204015 AACCAAGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGACCGTCCTC 203956 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || |||||||| || |||||||||||||| ||||| || Sbjct 203955 CAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTGTCCTG 203896 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| ||||| || |||||||| ||| ||| ||||| ||||||| ||||| Sbjct 203895 AATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATTGTCTT 203836 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | |||||| Sbjct 203835 CCCCGTCAATGTCTTGACAAAGATTTGCAT 203806 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||||| || || || || ||||| |||| || |||| ||||| || Sbjct 203558 ACGAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCA 203499 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| | ||| || ||||| ||||||||||| || ||||| ||| Sbjct 203498 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGA 203439 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || || |||||||| || || || || | ||| | |||||| Sbjct 203438 ATCTTCGACTTGACATTGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTT 203379 Query 195112 CCTGTCAAAGTTTTTAC 195128 || || | || ||||| Sbjct 203378 CCGGTAAGGGTCTTTAC 203362 >seq737 Length=337091 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || ||||| |||| |||||||| || || ||| Sbjct 284546 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTTCGGCCGTCCTCG 284605 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || |||||||| || || |||||||| || || ||||| || ||||| ||| Sbjct 284606 AGTTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 284665 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| |||||| || || |||||||| ||| ||||| || ||||| | ||||| Sbjct 284666 ATTTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 284725 Query 195112 CCTGTCAAAGTTTTTACGAA 195131 || || | || || ||||| Sbjct 284726 CCCGTAAGGGTCTTCACGAA 284745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109471009651415