Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq698 107 1e-18
seq27 89.7 3e-13
>seq698
Length=460427
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || |||| |||| |||| ||| || ||||||||
Sbjct 203768 TCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAG 203709
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| |||||||| ||||| |||| | ||||||||||| ||||| |||||||
Sbjct 203708 ATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTG 203649
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| |||| || | ||| || || | ||| || || || || ||||||||||||||
Sbjct 203648 TCGATCGTGTCCGAAGACTCCACCTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACG 203589
Query 34971 AAGATCTGCATA 34982
|| || ||||||
Sbjct 203588 AATATTTGCATA 203577
Score = 95.1 bits (104), Expect = 8e-15
Identities = 141/198 (71%), Gaps = 8/198 (4%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||| ||| ||||| ||||| ||||| || ||| |||| |||| || |||||
Sbjct 203553 GTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTG 203494
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| ||||| || || | ||| |||||||| | || | ||||||||||| ||||||
Sbjct 203493 CTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTT 203434
Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
| ||||| || | ||||| || | ||| || || | ||| ||||| ||||
Sbjct 203433 CGACTTGAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTC 203378
Query 34954 CCGTGAGAGTCTTCACAA 34971
| || || ||||| ||||
Sbjct 203377 CGGTAAGGGTCTTTACAA 203360
Score = 87.8 bits (96), Expect = 1e-12
Identities = 145/209 (69%), Gaps = 18/209 (9%)
Strand=Plus/Minus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| ||||| | || | || || || || ||||||
Sbjct 203257 GTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCG 203198
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || | ||| || ||||| | || | ||||||||||| |||||| ||
Sbjct 203197 GCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTA 203138
Query 34905 ACG-----GATGCTATC----GATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCC 34955
||| |||| |||| |||| || |||||| | || ||||| || ||
Sbjct 203137 ACGTTGTCGATGGTATCCGAGGATT---CGACCTCAAGA------GTGATGGTCTTGCCG 203087
Query 34956 GTGAGAGTCTTCACAAAGATCTGCATATT 34984
||||| ||||| || ||||||||||| ||
Sbjct 203086 GTGAGGGTCTTGACGAAGATCTGCATCTT 203058
>seq27
Length=240170
Score = 89.7 bits (98), Expect = 3e-13
Identities = 146/208 (70%), Gaps = 8/208 (4%)
Strand=Plus/Plus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| ||||| || ||||| ||||| ||||| || || | || | || || || ||
Sbjct 62188 GTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTG 62247
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| ||||| || || ||||| || ||||| | || | ||||||||||| |||||
Sbjct 62248 CTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTT 62307
Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
||||| || | ||||| || | | ||| || || | ||| || || || |
Sbjct 62308 GGACTTGAC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGC 62363
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||||| ||||| || |||||||||||
Sbjct 62364 CCGTGAGGGTCTTGACGAAGATCTGCAT 62391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630652428360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |