Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq698 107 1e-18 seq27 89.7 3e-13 >seq698 Length=460427 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || |||| |||| |||| ||| || |||||||| Sbjct 203768 TCCTTCTGAATGTTGTAGTCGCTCAGCGTTCGGCCATCCTCCAACTGCTTACCGGCAAAG 203709 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || |||||||| ||||| |||| | ||||||||||| ||||| ||||||| Sbjct 203708 ATAAGTCGTTGTTGGTCGGGCGGGATTCCCTCCTTGTCCTGGATCTTGGATTTGACGTTG 203649 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | ||| || || || || |||||||||||||| Sbjct 203648 TCGATCGTGTCCGAAGACTCCACCTCAAGGGTGATTGTCTTGCCAGTGAGAGTCTTCACG 203589 Query 34971 AAGATCTGCATA 34982 || || |||||| Sbjct 203588 AATATTTGCATA 203577 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/198 (71%), Gaps = 8/198 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||| ||| ||||| ||||| ||||| || ||| |||| |||| || ||||| Sbjct 203553 GTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTG 203494 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || | ||| |||||||| | || | ||||||||||| |||||| Sbjct 203493 CTTGCCGGCGAAGATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTT 203434 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 | ||||| || | ||||| || | ||| || || | ||| ||||| |||| Sbjct 203433 CGACTTGAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTC 203378 Query 34954 CCGTGAGAGTCTTCACAA 34971 | || || ||||| |||| Sbjct 203377 CGGTAAGGGTCTTTACAA 203360 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 18/209 (9%) Strand=Plus/Minus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| ||||| ||||| | || | || || || || |||||| Sbjct 203257 GTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGCTTTCCG 203198 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || | ||| || ||||| | || | ||||||||||| |||||| || Sbjct 203197 GCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTCGACTTA 203138 Query 34905 ACG-----GATGCTATC----GATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCC 34955 ||| |||| |||| |||| || |||||| | || ||||| || || Sbjct 203137 ACGTTGTCGATGGTATCCGAGGATT---CGACCTCAAGA------GTGATGGTCTTGCCG 203087 Query 34956 GTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||||| ||||| || ||||||||||| || Sbjct 203086 GTGAGGGTCTTGACGAAGATCTGCATCTT 203058 >seq27 Length=240170 Score = 89.7 bits (98), Expect = 3e-13 Identities = 146/208 (70%), Gaps = 8/208 (4%) Strand=Plus/Plus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| ||||| || ||||| ||||| ||||| || || | || | || || || || Sbjct 62188 GTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTG 62247 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || ||||| || || ||||| || ||||| | || | ||||||||||| ||||| Sbjct 62248 CTTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTT 62307 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 ||||| || | ||||| || | | ||| || || | ||| || || || | Sbjct 62308 GGACTTGAC--AT--TGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGC 62363 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||||| ||||| || ||||||||||| Sbjct 62364 CCGTGAGGGTCTTGACGAAGATCTGCAT 62391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324630652428360