Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq434 91.5 2e-13
>seq434
Length=564148
Score = 91.5 bits (100), Expect = 2e-13
Identities = 283/438 (65%), Gaps = 0/438 (0%)
Strand=Plus/Minus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
|||||| || || ||||| |||| ||| ||||| ||||| || || ||||| | |
Sbjct 552336 CTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAGGGT 552277
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| || ||| || | || | |||| || | || || ||||||||||| | ||
Sbjct 552276 CCACTCGCCATTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCAGGAA 552217
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
| ||| | | | | |||||| ||||| ||| || ||| || || || || |
Sbjct 552216 AAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAA 552157
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| ||| | ||||| || || | ||| || || | |||| |||| || || || ||
Sbjct 552156 AACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACC 552097
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
|| |||| ||||| ||||| || || | || | | ||| || |||||||| || ||
Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037
Query 48425 TATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGAAATACC 48484
| || || || || | ||| || || |||| | || || | |||
Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977
Query 48485 TATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTC 48544
|||||||| ||||| || || || | || || |||||||| || || || || ||
Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 48545 TATACTATCATCTATCAT 48562
|| || || || ||||
Sbjct 551916 AATGCTGTCGTCCTTCAT 551899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562103565361800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |