Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq137 91.5 1e-13 >seq137 Length=246627 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 29767 GGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAG 29826 ||||| || | || || | ||| ||||| |||||| | ||||| ||||| | ||| Sbjct 148051 GGAAACGGCCGTGGTTCTCGCTCAAGCTGGACCTTCAGGGCGTCCACATGATCGACGTAC 148110 Query 29827 ACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 29885 ||||| ||||| |||| ||| | | ||| || || | || || ||||| || Sbjct 148111 ACGTGGGCGTCGCCCATAACGTGTGTTAGGCTC-CCGGGAACCAGATCGCATACGTGCGC 148169 Query 29886 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 29945 | ||| | ||| || || | ||| || ||||||||||| || || ||||| |||||||| Sbjct 148170 GAGCATATGCGTCAGCAGCGCGTAACTTGCGATGTTAAATGGGACACCGAGGCCCATGTC 148229 Query 29946 CCCCGACCTCTGGTAGAGCTGACA 29969 | |||| |||||| ||||| || Sbjct 148230 GCAGGACCGCTGGTACAGCTGGCA 148253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408613889879885