Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq27 87.8 1e-12 seq698 86.0 5e-12 >seq27 Length=240170 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || ||| | || |||| || | ||| Sbjct 62189 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCGTCCTCGAGTTGC 62248 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || ||||| || |||||||||||||| || | ||| | ||||||||||| ||||| Sbjct 62249 TTGCCGGCGAAGATCAGTCGCTGTTGGTCGGGGGGGATTCCCTCCTTGTCCTGGATCTTG 62308 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || ||||||||| | || || || || ||||| Sbjct 62309 GACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTG 62368 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || || |||||||| Sbjct 62369 AGGGTCTTGACGAAGATCTGCAT 62391 >seq698 Length=460427 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || |||||||| || || || ||||| || || ||| | ||| |||| || | ||| Sbjct 203263 TGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCGTCTTCAAGTTGC 203204 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || ||||| || |||| ||||||||| || | ||| | |||||||||||| Sbjct 203203 TTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTC 203154 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || || || ||||| || ||||| |||| | || || | |||||| ||||| || Sbjct 203540 TCCTTCTGGATGTTGTAGTCGGATAGGGTTCGGCCATCCTCAAGCTGCTTGCCGGCGAAG 203481 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 |||| |||||| || || | |||| |||||||||||| |||||| || ||| Sbjct 203480 ATCAATCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTG 203421 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || |||| ||| ||||||| || || || ||||| || | || |||||| Sbjct 203420 TCGATGGTGTCGGACGACTCGACCTCCAAGGTGATGGTCTTTCCGGTAAGGGTCTTTACA 203361 Query 48756 A 48756 | Sbjct 203360 A 203360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380934141205635