Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq434 239 8e-58 seq334 197 3e-45 >seq434 Length=564148 Score = 239 bits (264), Expect = 8e-58 Identities = 896/1386 (65%), Gaps = 47/1386 (3%) Strand=Plus/Minus Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAG---TTTGAAGT 212962 ||||||||| | |||||| || || | || || | | || || || || || || Sbjct 553152 AGGGTTGACAACCTGGAATTCGCCAGCAAGGACACGGC---GGGAATAGATATTCGAGGT 553096 Query 212963 GTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGG 213022 ||| ||||||| || || ||||| ||||| ||||| | ||| |||||||| |||||||| Sbjct 553095 GTAAGGCTCGAAGCATTCATTGTTACCCAGGATCTGGGAAGTACTGGCTGTAGGCATGGG 553036 Query 213023 AGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG--AAGCTCTGCC 213080 || |||| | ||||| | || || | | || | | || | ||| || | Sbjct 553035 GGCGACCAACAAGCTGTTGCGTACACCA-GTTTGCTTAATTTTCTCCTTTAGGCT-TGTC 552978 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG 213140 |||||||| | ||| || | || ||||||||||| | || | ||| Sbjct 552977 CAGTCCCAGAGATCCGACGGGG---------TGACATTCCACATGTCGTATTGAAGGATA 552927 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 || | || || || | || | ||||| || |||| ||||||| | || Sbjct 552926 CCCTGCGAGACAGGAGAACCTTCATAGGTAGAGTAAGGTCCATCAACCTTGGCAATATCC 552867 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 | ||||| || ||| || | |||||| || || || |||| | |||| |||| | || Sbjct 552866 GAAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTG 552807 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCATGCGTT-GGAACACATCAGCCAGCCCCTGGAC 213319 |||||||| ||| ||| ||||| || ||| |||| |||||| || ||||| || Sbjct 552806 GCCTCTGGTGACTCGAAAGGCATGCGCA-GCGCCAGGAATGTATCAGCAAGACCCTGAAC 552748 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAA 213379 || | || ||||| | ||||| || ||| || | ||| | |||||| | Sbjct 552747 ACCAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGGGCCTCTGGGACGGGGTAGTA 552688 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 |||| ||| ||||| |||| |||||| | | | |||| || || | || | Sbjct 552687 GTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCATGCA---A 552631 Query 213440 CTCGTGATTGAACACGTAG---CCCCCGTCCTGCACAA--ACTCA-GGCAGGGCGATGCT 213493 || || ||| | ||| ||| ||| | ||| | | | |||| || | | Sbjct 552630 CTTCTG---GAAGTCATAGGTTCCCTCGTTATAGTCAACGAATGACGGCAACGCAAGGGA 552574 Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 |||| ||||||||| |||||||| | || | | | |||||| |||||||| ||||| || Sbjct 552573 AGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGTGCAGAG 552514 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCT 213612 ||| || || || || || ||||||| ||||| ||| ||| | |||| ||||| Sbjct 552513 GTTCGAGCTGCGAATAGTACCAAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATCCT 552455 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAG 213670 |||| |||||| ||||| || ||||| ||| | | || || ||| ||| || Sbjct 552454 TGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAAT--GGCATACCACAG 552397 Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAG 213730 | | ||||| | | | | | | || || | || ||||||| ||||| || Sbjct 552396 CTTCTGAGCCTTAATCTTCTGGCGGCCACGACC---CTCTGCTTCGTACTTCTCGTACAG 552340 Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAG 213790 | | || |||| ||| |||| | | || || || || ||| |||||||| Sbjct 552339 GGCCTCAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGTTGGGGCACATGAG 552280 Query 213791 GCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGG 213849 | |||| || || | | |||| ||| | || |||||| ||||| || | ||| || || Sbjct 552279 GGTCCACTCGCCATTCTTCTC-GACACGCTTCATGAAGAGGTCGGGAATCCAAAGAGCCA 552221 Query 213850 TGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGT 213909 ||| || || | || | || ||| || ||| || || || || || || | Sbjct 552220 GGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACT 552161 Query 213910 CAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---C 213966 | || | |||| |||||| ||||| | ||||||||||| || || || |||||| | Sbjct 552160 CGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGC 552101 Query 213967 CGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGT 214026 | |||||||| || || || | ||||||| || || | |||||| | |||| Sbjct 552100 CACCCTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGT 552041 Query 214027 TGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGA 214086 | || ||||| || || || || || ||||||| || | | | | ||| || Sbjct 552040 TCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGA 551981 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 | || || |||||||| ||||||||||||||||||| | | | || || ||| | Sbjct 551980 GACCAATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATAC 551921 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACG 214206 | | |||||||| || | | || | | ||||||| |||||||| | | || | Sbjct 551920 CCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTG 551861 Query 214207 AGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGT 214266 |||| ||||| || || ||| ||||||| | | | ||| | || | ||| | | Sbjct 551860 TTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTAT 551801 Query 214267 AGGTCT 214272 |||||| Sbjct 551800 AGGTCT 551795 >seq334 Length=652976 Score = 197 bits (218), Expect = 3e-45 Identities = 491/740 (66%), Gaps = 33/740 (4%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 129213 CTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATGTTCTC 129154 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952 ||||||| ||||||||| | | | |||||| ||| | ||| | | | Sbjct 129153 CATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGAGGGCGA------C 129100 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 || || | || |||||| |||||||||| | ||||||| || ||||||||| | Sbjct 129099 CAATAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAG 129040 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 |||| ||||| |||| || | || |||| ||| || ||||| || | Sbjct 129039 TAGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGAT 128980 Query 48073 AATCTGCTTAACGCGGGACT---CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCAT 48129 |||| || ||| || | | | | |||||| |||||| | | || | Sbjct 128979 GATCTTCTGGACGACATCCTTGCCGGGGCGGTTGTTG---AGGTGCGAGA---ACAGTAG 128926 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||| ||||| |||| | || ||||| || ||||||| |||| |||||| || Sbjct 128925 GCAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAG 128866 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| || | || ||||||||||| || | ||||| | || |||||| Sbjct 128865 GCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAA 128806 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 ||||||||| || || || || ||| | | | || |||| | | |||||||| | Sbjct 128805 GATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTGGACTTCTTGTCAGC 128746 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||||| || |||||||| |||||| | |||||| || || || || ||||| Sbjct 128745 GATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTT 128686 Query 48370 GAAGAGCT---TCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGC 48423 |||||| | |||| || | | ||| | || || | |||| || | Sbjct 128685 GAAGAGATGGGTCTT---CTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAG---AGA 128632 Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||| |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 128631 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGCGCCTC 128572 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | ||| || || ||||||| ||| | || ||||| ||||| || || || || Sbjct 128571 GGGAATCTGGACCTCGCCAGAGAATCGCTCGACAAGGTTCTCGTTGACAATGCCGTCGGA 128512 Query 48544 AGCAGCAAAGAAGGCAAGGA 48563 || || || |||||||||| Sbjct 128511 TGCGGCGAAAAAGGCAAGGA 128492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931524125100800