Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq434 233 4e-56 seq334 199 7e-46 >seq434 Length=564148 Score = 233 bits (258), Expect = 4e-56 Identities = 957/1479 (65%), Gaps = 71/1479 (5%) Strand=Plus/Minus Query 221409 AAGACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGG 221468 ||||| |||| ||| || |||||||| ||||| |||||| |||||| || | ||| Sbjct 552865 AAGACGCAGTCAAGGCGGCATGGTAGATTGTCTCGAAGATCTGCTTGTTCAGCTGCCTGG 552806 Query 221469 CCTCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTC 221528 |||| || || ||| ||||| |||||| | | || || || || ||||| || | Sbjct 552805 CCTCTGGTGACTCGAAAGGCATGCGCAGCGCCAGGAATGTATCAGCAAGACCCTGAACAC 552746 Query 221529 CGATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAA 221586 | | ||| ||||| | ||||| | ||||| | ||| || ||||| ||||| || | Sbjct 552745 CAAGACCAATGGGACGGTGTCGCATGTTGCTGTTACGG--GCCTCTGGGACGGGGTAGTA 552688 Query 221587 GTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTT 221646 ||||||||| || | |||| ||||| || || ||||| | ||||| || ||| Sbjct 552687 GTTGACGTCAATGATTCTGTTCAGGTTGTGAACGACGACTTGAGTAACCTCATGCAACTT 552628 Query 221647 CTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC 221706 |||| | || | | || |||| | || || || | | || Sbjct 552627 CTGGAAGT-------CA--TAGGTTCCCTCGTTATAG---TCAACGAATGACGGCAACGC 552580 Query 221707 AACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGT 221766 || | |||| ||| || || ||||||||||| | | |||| |||||||| || Sbjct 552579 AAGGGAAGCCAAGTTGCAAACAGCCACCTCGTCAGGGGCAGAGTACTCGATGATCTCAGT 552520 Query 221767 ACAGAGGTT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGC 221823 |||||||| ||||| || || || |||| || || || |||||| ||| | Sbjct 552519 GCAGAGGTTCGAGCTGCGA---ATAGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-C 552464 Query 221824 AGCG-TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGT 221882 || | |||||||| ||||| ||||| |||||||| |||||| | ||||| | Sbjct 552463 AGTGATCCTTGTAAAGCATGAAGGGGTTTCCAGTCTCAGTCTGAGCTTCGAGAATGGCAT 552404 Query 221883 CCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGC----ACCCTCGGTCTTTTCATAC 221938 ||| || | |||| || | || ||| | | || |||||| | ||| ||| Sbjct 552403 ACCACAGCT-TCTGAGCCTTAA--TCTTCTGG-CGGCCACGACCCTCTGC---TTCGTAC 552351 Query 221939 --CCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG 221996 | ||| || || | |||||| || || || | ||| | ||||| || || | Sbjct 552350 TTCTCGTACAGGGCCT--CAAACTCGTCGCCATAGACATCGGCTAGGCCAGGGCATTCGT 552293 Query 221997 CGGGACACATCAGACTCCAGT-GC--TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCG 222053 ||| ||||| || |||| | || || || || ||| | || |||||||||||| | Sbjct 552292 TGGGGCACATGAGGGTCCACTCGCCATTCTTCTC---GACACGCTTCATGAAGAGGTCGG 552236 Query 222054 GGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCC 222113 | ||||| || ||| | || ||||| | || || || ||| ||||| ||| || | Sbjct 552235 GAATCCAAAGAGCCAGGAAAAGATCACGGGCACGGACTTCTTCCTTGCCGTGGTTCTTTC 552176 Query 222114 TCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGC 222173 || |||| ||||| |||| || | |||||| ||||| ||||||| ||| | ||| | Sbjct 552175 GAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGCTCGAGATAGATGGCAAAAGCAC 552116 Query 222174 CGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AGCG---TTGAAGATGCGA 222229 | |||| ||||||||||||||| || | | | || || || | ||||||| || Sbjct 552115 CAGGTCTCTTGTTGCCACCCTGGTCTA----CGTATCTAGCAGTGTTATTGAAGACACGG 552060 Query 222230 AGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCC 222289 || | ||||| | ||||| || ||||| ||||| |||||| | ||| || Sbjct 552059 AGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCG 552000 Query 222290 C---TCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAG 222346 | | ||| | | || | || ||||||||||| || ||||||||||||||| Sbjct 551999 CGAATGCGGTGGAT-GTTGAGA--CCAATACCACCGGCCATCTTGGAGATCATGGCGCAG 551943 Query 222347 CTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAA 222406 |||| || ||||| ||| ||||| || ||| ||||| | || | || || || Sbjct 551942 GTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCAACGAGGAAGCAG 551883 Query 222407 GACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 || || | ||||| | || | | || || || || || || ||| || || ||| Sbjct 551882 GATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGGGGAGGCATGGGTGAAG 551823 Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAAT 222525 || || ||||| || | || |||| || || | | | | || ||| || Sbjct 551822 TATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCACATCATCACCCCAGATG 551763 Query 222526 CTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACC----CTTGGAGC 222581 | | | | || | |||| ||||| ||| || ||||| || || | | | ||| Sbjct 551762 CCGACAGCCACA-CGCATGATCATGTGCTGCGGTCTCTCGAC--GATCTTATCGTCAAGC 551706 Query 222582 TGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTC 222641 | |||||| || ||| |||| ||||||||| || ||||| | | || ||||||| Sbjct 551705 T--TGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCTC 551648 Query 222642 TGCCGTGAACCACGGCGGCGTCCAGCTCCGACTTGTGCTTTACGCTCAACTCGAAAAAGC 222701 || | | || | ||| | ||| | ||| |||||| | | | ||||| | Sbjct 551647 TGTCATAGACAATGGCAGAGTCAAAGTCCTCCTTGTGTCTCATGACACACTCGTAGGTCT 551588 Query 222702 GCTCAGACACGAGGGGAGCGTTCTCTTTGGTGTCGGGGTTAACGTTGTGGTACAGCTGCC 222761 || ||| | | |||| || | || | | ||||| || | |||||| || | | Sbjct 551587 CCTTAGAGATCATAGGAGATGGCTTTCTGTTCTTTGGGTTGACATAGTGGTAGAGATCAC 551528 Query 222762 ACATGGCATCAGAGAAC-GTGTCGGGAGTCTGCTTGTGCAGATTCGACACGGCGATCCGA 222820 ||| || |||| || | || | ||||||||||| || || |||||||| || || Sbjct 551527 TGATGACAGCAGACCACTGCTTCTTG-GTCTGCTTGTGTAGGTTTGACACGGCAATACGT 551469 Query 222821 GACGCCAAGATACCATAGTCAGGGTGCACGGTGGTCATG 222859 | || | ||| ||||||| ||||| | ||||||| Sbjct 551468 GCAGCGAGGATGGCATAGTCTGGGTGGGTGACGGTCATG 551430 >seq334 Length=652976 Score = 199 bits (220), Expect = 7e-46 Identities = 559/856 (65%), Gaps = 22/856 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACT-CAAACTGGACCGCCGAAGAGATTGATCT 25535 || ||| |||||||||||||| | | || || | ||||||||| || ||||||||||| Sbjct 128368 ATCTGGCAGATGTACAAGAAG-CACGAAGCTTCCTTCTGGACCGCTGAGGAGATTGATCT 128426 Query 25536 GGCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | ||| |||| || ||| | | || ||| || || || Sbjct 128427 CTCCAAGGATCTCCACGACTGGAGCAACCGCCTAAACGATGATGAGAAGTTCTTCATCTC 128486 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || || || || || || || || || || |||||||| || |||| | Sbjct 128487 CCACATCCTTGCCTTTTTCGCCGCATCCGACGGCATTGTCAACGAGAACCTTGTCGAGCG 128546 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| | | || || ||| ||||| || ||||||||||||||||| || Sbjct 128547 ATTCTCTGGCGAGGTCCAGATTCCCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGAT 128606 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || | || || || || ||||| | || Sbjct 128607 GGAGAACATCCACTCCGAGACCTACTCT---CTCCTCATTGACACATACATCAAGGAGCC 128663 Query 25770 CGCCGAGAGAGATCGG-CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 |||| ||| ||| | || || |||||||| ||| || ||||| ||||||| Sbjct 128664 CGCCCAGA-AGACCCATCTCTTCAACGCCATCGACACCATCCCTTGCATCCGCAGGAAGG 128722 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 || |||||| || | |||||| | ||| | || || | | |||| || | | Sbjct 128723 CGGACTGGGCCCTGCACTGGATCGCTGACAAGAAGTCCACCTTCGCCCAGCGTTTGATCG 128782 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || || ||||||||||| ||||||||| | || || ||||||||||||||| Sbjct 128783 CCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCA 128842 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| ||| ||| || |||||||||||| | ||||||| Sbjct 128843 AGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCTAACGAGCTCATCTCGCGTGACGAGG 128902 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA--ACCTTC 26066 ||||||||| || || |||||||| || | | || ||| ||| |||| || Sbjct 128903 GTCTCCACACCGACTTCGCCTGCCTACTGTTCTCG---CAC---CTCAACAACCGCCCCG 128956 Query 26067 TCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 ||| || |||| | | ||||||| ||| || || | |||||| |||| || Sbjct 128957 GCAAGGATGTCGTCCAGAAGATCATCACAGATGCCGTCGCCATCGAGCAGGAATTCTTGA 129016 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 | ||||||||| || ||||||| || ||||| | Sbjct 129017 CGGAGGCACTGCCCTGCGCCCTACTCGGCATGAACGCCAACCTCATGAAGCAGTACATCG 129076 Query 26186 AGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTA 26245 ||| || ||||||| ||| || | || || || | | ||| | | | | Sbjct 129077 AGTTCGTCGCCGACCGTCTATTGGTCGCCCTCGGTAACGAGAAGGTGTACCGCGCCACAA 129136 Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305 |||| |||||||| ||||| ||||| || | | || |||||||||||||| || ||| Sbjct 129137 ACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGCAAGACCAACTTCTTCGAGAAGC 129196 Query 26306 GGGTCGGCGACTATCA 26321 | ||||||||||| || Sbjct 129197 GCGTCGGCGACTACCA 129212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928836150132800