Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq698 95.1 8e-14
>seq698
Length=460427
Score = 95.1 bits (104), Expect = 8e-14
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| || || ||||||||||| || || ||||||||||||||||||||||| |||||||||
Sbjct 203960 TCCTCCAGCTGCTTTCCAGCGAAGATGAGACGTTGTTGATCAGGAGGAATGCCTTCCTTG 203901
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737
|| |||||||| || || || || || || | | | ||| ||||||||
Sbjct 203900 TCCTGAATCTTGCTCTTCACGTTGTCGATGGTGTCGGAAGATTCAACTTCGAGGGTAATT 203841
Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || | ||||| || || |||||
Sbjct 203840 GTCTTCCCCGTCAATGTCTTGACAAAGATTTG 203809
Score = 89.7 bits (98), Expect = 3e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| |||||||| ||||| || || || || || || | || || || | |||||
Sbjct 203282 ACGCAGACGGAGGACAAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAAAGAGT 203223
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| ||||||||||||||||| || ||||| | || ||||| ||||| || || ||
Sbjct 203222 GCGACCGTCTTCAAGTTGCTTTCCGGCGAAAATCAATCGCTGTTGGTCAGGGGGGATGCC 203163
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|||||||| || ||||| || || || || ||||| | | | |||||
Sbjct 203162 CTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTATCCGAGGATTCGACCTCAAG 203103
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || |||||||| ||||| ||||| || ||
Sbjct 203102 AGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTG 203064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268147243335260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |