Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq501 89.7 6e-13 >seq501 Length=313222 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 ||||| || |||||||| | ||||||||| | || ||| || | || |||| Sbjct 245158 CCATGGTAGATTGCATAGAGAGCGTTCATATTTGCCAACAATGCCTGCGACGTACAGACA 245099 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 || || || || || ||||||| ||| ||||| |||| || ||||| |||| || ||| Sbjct 245098 TTGCTAGTCGCCTTCTCTCTTCGAATGTGCTGTTCTCGGGTCTGTAGGGCTAGTCGGTAC 245039 Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451 || | |||| | ||| || | || || | || || || ||||||||||| Sbjct 245038 GCTTTACCGCCTAGTCGATCCTTAGAAAGGCCAACTAATCGCCCGGGCATCTTTCTCTTG 244979 Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511 | ||| || || ||||| || || || || |||||| |||||| || | ||| Sbjct 244978 TGCTTCTCCTGAACGGCGAAGAAGGCGGCGTGGGGGCCTCCGAATCCCAATGGTACACCG 244919 Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540 || |||||| || || | |||||||| Sbjct 244918 AATCTTTGCGCGCTTCCAAATGCAATATC 244890 Score = 84.2 bits (92), Expect = 3e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||| |||| |||| ||| || || ||||| || | | Sbjct 244541 CATAGCTTCGGCAGCAGCAGTACCTTCGTCTAGAAGACTGGCATTGGCTATGGGAAGGGC 244482 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 |||||| || || | | || ||| | |||| ||| | ||||||| ||||| || Sbjct 244481 TGTAAGGTCCGTAACCATGGTCTGGAAGTTGAGTAAGGACTCCAATCGGCCCTGGCTGAT 244422 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038 || | || || || || || ||||||||| || ||||| || ||||| || || Sbjct 244421 TTCTGGCTGGTAAGGGGTATAGCTCGTGTACCAAGCGGGGTTCTCGAGCACGTTCCGTTG 244362 Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077 ||||| | || ||| ||||||||||||||||| || Sbjct 244361 AATGACAGCAGGCGTATGTGTTCCATAGTATCCTTGGCC 244323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578993008077400