Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq501 89.7 6e-13
>seq501
Length=313222
Score = 89.7 bits (98), Expect = 6e-13
Identities = 181/269 (67%), Gaps = 0/269 (0%)
Strand=Plus/Minus
Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331
||||| || |||||||| | ||||||||| | || ||| || | || ||||
Sbjct 245158 CCATGGTAGATTGCATAGAGAGCGTTCATATTTGCCAACAATGCCTGCGACGTACAGACA 245099
Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391
|| || || || || ||||||| ||| ||||| |||| || ||||| |||| || |||
Sbjct 245098 TTGCTAGTCGCCTTCTCTCTTCGAATGTGCTGTTCTCGGGTCTGTAGGGCTAGTCGGTAC 245039
Query 139392 GCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTA 139451
|| | |||| | ||| || | || || | || || || |||||||||||
Sbjct 245038 GCTTTACCGCCTAGTCGATCCTTAGAAAGGCCAACTAATCGCCCGGGCATCTTTCTCTTG 244979
Query 139452 TACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCA 139511
| ||| || || ||||| || || || || |||||| |||||| || | |||
Sbjct 244978 TGCTTCTCCTGAACGGCGAAGAAGGCGGCGTGGGGGCCTCCGAATCCCAATGGTACACCG 244919
Query 139512 AACCTTTGCATACTACCTACAGCAATATC 139540
|| |||||| || || | ||||||||
Sbjct 244918 AATCTTTGCGCGCTTCCAAATGCAATATC 244890
Score = 84.2 bits (92), Expect = 3e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918
||| || || || || ||||| |||| |||| ||| || || ||||| || | |
Sbjct 244541 CATAGCTTCGGCAGCAGCAGTACCTTCGTCTAGAAGACTGGCATTGGCTATGGGAAGGGC 244482
Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978
|||||| || || | | || ||| | |||| ||| | ||||||| ||||| ||
Sbjct 244481 TGTAAGGTCCGTAACCATGGTCTGGAAGTTGAGTAAGGACTCCAATCGGCCCTGGCTGAT 244422
Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTG 140038
|| | || || || || || ||||||||| || ||||| || ||||| || ||
Sbjct 244421 TTCTGGCTGGTAAGGGGTATAGCTCGTGTACCAAGCGGGGTTCTCGAGCACGTTCCGTTG 244362
Query 140039 TATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACC 140077
||||| | || ||| ||||||||||||||||| ||
Sbjct 244361 AATGACAGCAGGCGTATGTGTTCCATAGTATCCTTGGCC 244323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578993008077400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |