Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq434 120 9e-22 seq334 118 3e-21 seq723 111 5e-19 seq116 91.5 4e-13 >seq434 Length=564148 Score = 120 bits (132), Expect = 9e-22 Identities = 351/535 (66%), Gaps = 7/535 (1%) Strand=Plus/Minus Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029 || || | |||||| ||||| || || || | ||| || || ||| | || ||| Sbjct 552197 TCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGC 552138 Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086 || ||||| || |||||| |||| |||||| |||||||| ||||| || | |||| Sbjct 552137 TCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCA 552078 Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146 || ||||||||||||| ||||| || | |||||| || || ||||| || || ||| | Sbjct 552077 GTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCA 552018 Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TT 156205 || | || || | | ||||| || || | || ||||||||||| | |||| || Sbjct 552017 ATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACC-GGCCATCTT 551959 Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265 || || ||||| ||| | || | | | ||||| ||||| || || | ||| Sbjct 551958 GGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCAT 551899 Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325 | || |||| || | |||| | ||||||||||| ||||| || || || Sbjct 551898 GTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGG 551839 Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385 | ||||| | || || || | ||||| | || |||| ||| |||||| | Sbjct 551838 GGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCAC 551779 Query 156386 ATTA-GACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444 || | |||| | || | || || || | ||| ||| ||||| || | ||| || | Sbjct 551778 ATCATCACCCCAG-ATGCCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGACGA 551720 Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || | |||| || || |||| || |||| ||| || || ||||| || Sbjct 551719 TCTTATCGTCAAGCTTGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTA 551665 >seq334 Length=652976 Score = 118 bits (130), Expect = 3e-21 Identities = 238/353 (67%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| || || ||| || || | ||||| |||||| || ||||| || || | Sbjct 128570 CCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 128629 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424 | ||| || ||||| || |||||||| || ||| ||||||| | | || ||||||| Sbjct 128630 ACTCTCTCCTCATTGACACATACATCAAGGAGCCCGCCCAGAAGACCCATCTCTTCAACG 128689 Query 133425 CCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484 |||| | | ||||| || | ||| | |||||||| | | |||||| | Sbjct 128690 CCATCGACACCATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTG 128749 Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544 ||||| | | || || ||| | | || ||||| | || |||||||| || | Sbjct 128750 ACAAGAAGTCCACCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCT 128809 Query 133545 tCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 |||| ||||| ||| ||| || || ||||| || ||||||||| | | || || ||| Sbjct 128810 TCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGA 128869 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657 || |||||||| || || || | ||||||| || |||||||| || ||| Sbjct 128870 CCTTCTCTAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCC 128922 >seq723 Length=1045888 Score = 111 bits (122), Expect = 5e-19 Identities = 183/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Plus Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643 |||| | ||| || || || ||||| ||| || || || || || |||||||||||| Sbjct 693437 TTGACAAGACGTCGTTGGATGTAACCGGTTTCAGCCGTCTTGACGGCAGTATCAATTAGA 693496 Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703 || | |||||| |||| || |||||||| | ||| ||| || || | | || Sbjct 693497 CCCTCGCGACCAGCCATGGCGTGGAAGAAGAACTCCGTAGGTGTTAAACCACGTAGGTAG 693556 Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763 ||| | || ||||| ||||| ||||| || || | || ||||||||||||||| || Sbjct 693557 GAGTTTTCGACGAAGCCACGGGCCTCAGGTGAGTAATCATCCTTGGTAAAGTGTGGTAGA 693616 Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC 302823 || | | || | ||| | || ||||| || || || ||| ||||||| || | || Sbjct 693617 GTTCGATACTTGAAACCGAAGGGAATACGTTTGCCTTCGACGATCTGCTGGCC--GACAA 693674 Query 302824 GA--AATCATCTGCGAAATATT 302843 || | ||||||| ||||| || Sbjct 693675 GAGCAGTCATCTGAGAAATGTT 693696 Score = 84.2 bits (92), Expect = 6e-11 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | |||||| |||||| |||| ||||| |||| |||| ||||| Sbjct 692642 AGAATTTCCTTCAGACGGGGGACACCAAGGGTGACGTTT---TTGGCAGCAATACCAGTG 692698 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 |||||||| ||||| ||||| | || || | ||||||||||| || || || | Sbjct 692699 AAGTGGAAGGTATTTAGAGTCATCTGCGTCGCAGGCTCACCAATTGACTGCGCAGCCAAT 692758 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 692759 ACACCAACCATTTCGCCAGG 692778 >seq116 Length=170512 Score = 91.5 bits (100), Expect = 4e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || ||||||| | ||||| ||||||||| |||||||| |||| |||||||||||| || Sbjct 37274 GAAGCACCGTACGCAATCAAACAATCACGTTCCATTTCTCCGAGACGAAGACCACCGTCT 37333 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601 | | | ||| || | |||||| ||||| || | | ||| ||| || || Sbjct 37334 CTCGATCGACCTTCCGTAGGCTGGCGAGTAAGGATGGCTCGAGGGCCGCGTGAACGCGAG 37393 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661 || |||||| | ||||| ||||| || ||||||||| | || ||| |||||||| Sbjct 37394 TGCATCTTATCTTGAACCATGTGCTTCAGTCGCTGGTAGTAGATTGGTCCGTTGAAGATG 37453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471803551041065