Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq434 120 9e-22
seq334 118 3e-21
seq723 111 5e-19
seq116 91.5 4e-13
>seq434
Length=564148
Score = 120 bits (132), Expect = 9e-22
Identities = 351/535 (66%), Gaps = 7/535 (1%)
Strand=Plus/Minus
Query 155970 TCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGC 156029
|| || | |||||| ||||| || || || | ||| || || ||| | || |||
Sbjct 552197 TCTTCCTTGCCGTGGTTCTTTCGAAGGTCCAGGAACTCGAAAACATCCGAGTGCCAAGGC 552138
Query 156030 TCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCA 156086
|| ||||| || |||||| |||| |||||| |||||||| ||||| || | ||||
Sbjct 552137 TCGAGATAGATGGCAAAAGCACCAGGTCTCTTGTTGCCACCCTGGTCTACGTATCTAGCA 552078
Query 156087 GTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGA 156146
|| ||||||||||||| ||||| || | |||||| || || ||||| || || ||| |
Sbjct 552077 GTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGAGGTGCCGTTAGTGCCGGCA 552018
Query 156147 ATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCAT-TT 156205
|| | || || | | ||||| || || | || ||||||||||| | |||| ||
Sbjct 552017 ATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACCAATACCACC-GGCCATCTT 551959
Query 156206 AGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCAT 156265
|| || ||||| ||| | || | | | ||||| ||||| || || | |||
Sbjct 551958 GGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCAT 551899
Query 156266 TGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGG 156325
| || |||| || | |||| | ||||||||||| ||||| || || ||
Sbjct 551898 GTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCCAGCATTGAAGAGAGTTGG 551839
Query 156326 TGTTGCATGAATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG 156385
| ||||| | || || || | ||||| | || |||| ||| |||||| |
Sbjct 551838 GGAGGCATGGGTGAAGTATTTGCTGGACATGAGGTTATAGGTCTGTATAACCTTCTCCAC 551779
Query 156386 ATTA-GACCCGTGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAA 156444
|| | |||| | || | || || || | ||| ||| ||||| || | ||| || |
Sbjct 551778 ATCATCACCCCAG-ATGCCGACAGCCACACGCATGATCATGTGCTGCGGTCTCTCGACGA 551720
Query 156445 TCACTCCATCAATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|| | |||| || || |||| || |||| ||| || || ||||| ||
Sbjct 551719 TCTTATCGTCAAGCTTGAGCAGATATGATCGCTCCAAAGTCTTGAAGCCGAAGTA 551665
>seq334
Length=652976
Score = 118 bits (130), Expect = 3e-21
Identities = 238/353 (67%), Gaps = 0/353 (0%)
Strand=Plus/Plus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || || ||| || || | ||||| |||||| || ||||| || || |
Sbjct 128570 CCGAGGCGCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 128629
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACG 133424
| ||| || ||||| || |||||||| || ||| ||||||| | | || |||||||
Sbjct 128630 ACTCTCTCCTCATTGACACATACATCAAGGAGCCCGCCCAGAAGACCCATCTCTTCAACG 128689
Query 133425 CCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484
|||| | | ||||| || | ||| | |||||||| | | |||||| |
Sbjct 128690 CCATCGACACCATCCCTTGCATCCGCAGGAAGGCGGACTGGGCCCTGCACTGGATCGCTG 128749
Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544
||||| | | || || ||| | | || ||||| | || |||||||| || |
Sbjct 128750 ACAAGAAGTCCACCTTCGCCCAGCGTTTGATCGCCTTTGCCGCCGTCGAGGGCATCTTCT 128809
Query 133545 tCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604
|||| ||||| ||| ||| || || ||||| || ||||||||| | | || || |||
Sbjct 128810 TCAGCGGTGCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGA 128869
Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
|| |||||||| || || || | ||||||| || |||||||| || |||
Sbjct 128870 CCTTCTCTAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTCGCC 128922
>seq723
Length=1045888
Score = 111 bits (122), Expect = 5e-19
Identities = 183/262 (70%), Gaps = 4/262 (2%)
Strand=Plus/Plus
Query 302584 TTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGA 302643
|||| | ||| || || || ||||| ||| || || || || || ||||||||||||
Sbjct 693437 TTGACAAGACGTCGTTGGATGTAACCGGTTTCAGCCGTCTTGACGGCAGTATCAATTAGA 693496
Query 302644 CCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAG 302703
|| | |||||| |||| || |||||||| | ||| ||| || || | | ||
Sbjct 693497 CCCTCGCGACCAGCCATGGCGTGGAAGAAGAACTCCGTAGGTGTTAAACCACGTAGGTAG 693556
Query 302704 GAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGG 302763
||| | || ||||| ||||| ||||| || || | || ||||||||||||||| ||
Sbjct 693557 GAGTTTTCGACGAAGCCACGGGCCTCAGGTGAGTAATCATCCTTGGTAAAGTGTGGTAGA 693616
Query 302764 GTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCAC 302823
|| | | || | ||| | || ||||| || || || ||| ||||||| || | ||
Sbjct 693617 GTTCGATACTTGAAACCGAAGGGAATACGTTTGCCTTCGACGATCTGCTGGCC--GACAA 693674
Query 302824 GA--AATCATCTGCGAAATATT 302843
|| | ||||||| ||||| ||
Sbjct 693675 GAGCAGTCATCTGAGAAATGTT 693696
Score = 84.2 bits (92), Expect = 6e-11
Identities = 103/140 (74%), Gaps = 3/140 (2%)
Strand=Plus/Plus
Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872
|||||||| | | |||||| |||||| |||| ||||| |||| |||| |||||
Sbjct 692642 AGAATTTCCTTCAGACGGGGGACACCAAGGGTGACGTTT---TTGGCAGCAATACCAGTG 692698
Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932
|||||||| ||||| ||||| | || || | ||||||||||| || || || |
Sbjct 692699 AAGTGGAAGGTATTTAGAGTCATCTGCGTCGCAGGCTCACCAATTGACTGCGCAGCCAAT 692758
Query 301933 ATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 692759 ACACCAACCATTTCGCCAGG 692778
>seq116
Length=170512
Score = 91.5 bits (100), Expect = 4e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541
|| ||||||| | ||||| ||||||||| |||||||| |||| |||||||||||| ||
Sbjct 37274 GAAGCACCGTACGCAATCAAACAATCACGTTCCATTTCTCCGAGACGAAGACCACCGTCT 37333
Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTA 251601
| | | ||| || | |||||| ||||| || | | ||| ||| || ||
Sbjct 37334 CTCGATCGACCTTCCGTAGGCTGGCGAGTAAGGATGGCTCGAGGGCCGCGTGAACGCGAG 37393
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
|| |||||| | ||||| ||||| || ||||||||| | || ||| ||||||||
Sbjct 37394 TGCATCTTATCTTGAACCATGTGCTTCAGTCGCTGGTAGTAGATTGGTCCGTTGAAGATG 37453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471803551041065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |