Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq334 158 1e-32 seq57 134 2e-25 seq434 123 3e-22 seq32 93.3 5e-13 >seq334 Length=652976 Score = 158 bits (174), Expect = 1e-32 Identities = 209/288 (73%), Gaps = 9/288 (3%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||| | ||||| |||| |||||||||||||| || ||||| Sbjct 128904 ACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGGCCGGGCATGAGACCACGCTT 128845 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| || ||| ||||||||||||||||||||||| Sbjct 128844 CTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATGCCCTCGACGGCGGCAAA 128785 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | |||| | |||| ||| |||||| || || ||||| |||||| | || || Sbjct 128784 GGCGATCAAACGCTGGGCGAAGGTG--GA----CTTCTTGTCAGCGATCCAGTGCAGGGC 128731 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 |||||| ||||| | | | | || | |||||||||||| ||||| ||| ||| Sbjct 128730 CCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCGATGGCGTTGAAGAGATGGGTCTT 128671 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| || ||||||| || ||||| || ||||| || |||||||| Sbjct 128670 CTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGAGAGTAGGTCTC 128623 Score = 136 bits (150), Expect = 5e-26 Identities = 228/323 (71%), Gaps = 9/323 (3%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| ||||| |||||| |||||| |||||||||||||| |||| ||||| Sbjct 129218 GCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGGGAGATG 129159 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 |||||| | ||| ||||| | | ||| ||| ||| ||||| | | Sbjct 129158 TTCTCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGAGGGCGACC 129099 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 | || ||||||||||| |||||||||||||| ||||||| |||||||||||||| Sbjct 129098 AATAGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTTCATGCCGAGT 129039 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || ||||| | ||| ||| || || | |||||| ||||||| || |||| Sbjct 129038 AGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGCATCTGTGATG 128979 Query 868931 ATCTGCCTGGGC-ACGTC--GGCCGAGG-GCTTGTTGACGAGCATCGTGTAGAGCAGGCA 868986 |||| |||| | || || |||| || | ||||||| | | || | | || ||||| Sbjct 128978 ATCT-TCTGGACGACATCCTTGCCGGGGCGGTTGTTGAGGTG---CGAGAACAGTAGGCA 128923 Query 868987 GGCAAAGTCGCAGTGCA-ACCCT 869008 ||| |||||| ||| | ||||| Sbjct 128922 GGCGAAGTCGGTGTGGAGACCCT 128900 >seq57 Length=873703 Score = 134 bits (148), Expect = 2e-25 Identities = 95/109 (87%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251 |||||||| || |||||| |||| || ||| |||| |||||| |||| |||||||||||| Sbjct 556963 AACTACCTGGATATCAAGGCTCTCCTTGATGTTGGTTGCAAGACTGTCGCCAACATGATC 556904 Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||| |||||||||||||||||||| || ||||||| | ||| Sbjct 556903 AAGGGCAAGTCTCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 556855 >seq434 Length=564148 Score = 123 bits (136), Expect = 3e-22 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| ||||| | || |||| || ||||| ||||||||||| || | ||||| || Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 |||||| ||||| || | ||| | ||||| ||||| | ||| | | || Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || || |||||| ||||||||| | ||||| || || ||||||||||| ||||| Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| |||||||||| ||||| ||||| || ||| || | || | || || Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCC 551857 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 || |||||||| || || Sbjct 551856 AGCATTGAAGAGAGTTGG 551839 >seq32 Length=575693 Score = 93.3 bits (102), Expect = 5e-13 Identities = 201/292 (69%), Gaps = 18/292 (6%) Strand=Plus/Plus Query 1572462 CGATGAGCAACTGGGCGATGCGCGCCTCGCCCTGGACAACGTGG---TCGGCGTCGGTGT 1572518 |||||||| ||||||||||| ||||| | | ||| || |||||||||| || Sbjct 310095 CGATGAGC---TGGGCGATGCGG---TCGCCGACGGCGACGGGGAAGTCGGCGTCGGCGT 310148 Query 1572519 GGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATGACGCCTGCGCCGA 1572578 ||||||| |||| ||| | |||||| |||||||| ||||||||||| ||||| Sbjct 310149 GGTTGAACAGCAGGACCTTGAGGGGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCCCG 310208 Query 1572579 CGTCGATG----CCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGCCCATAGTAGCCC 1572634 ||||||| | ||| ||||| ||| ||||||||||| ||||| || || Sbjct 310209 TGTCGATGAAGTGCTTCGAC-GCCAGCCCCGACCGCGGCGCCACCCGCCCGTACGTCCCT 310267 Query 1572635 GCGGGTATGGCCACGGCCAGACCGGTGCGCACCTGCGCGCGGCCGCGTGCCGGCACGGTC 1572694 || || | || | | | | || ||| |||| |||||| ||||| | | | Sbjct 310268 GCTGGCACCGCGATGCTGATGTCCGTCTCCACGAGCGCCTTGCCGCGCGCCGGGATCGAC 310327 Query 1572695 GTCG-TCCCGACAGCCCACAGATCGTATCCGGCGGCGCCTGGCG-TGCCGCG 1572744 |||| | |||| || |||| ||||| ||||||||| |||| ||||||| Sbjct 310328 GTCGCTTGCGAC-GCGTACAGGTCGTACCCGGCGGCG-AAGGCGCTGCCGCG 310377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107078061811165