Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02-
23] 745 sequences; 39,901,278 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq334 181 2e-39
seq57 116 6e-20
seq434 109 9e-18
seq32 100 5e-15
seq119 98.7 2e-14
seq379 87.8 3e-11
>seq334
Length=652976
Score = 181 bits (200), Expect = 2e-39
Identities = 217/293 (74%), Gaps = 9/293 (3%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
|||||||||||||| || |||||||||||||| ||||||| ||| || |||
Sbjct 128867 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAG 128808
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
|||||||||||||||||||||||| ||| | |||| ||| || ||| | | |||
Sbjct 128807 AAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTG-----GACTTCT 128753
Query 794497 TTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553
| || |||||| | || ||||| || ||||| | | | | || | ||||||
Sbjct 128752 T-GTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCG 128694
Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613
|||||| ||||| ||| ||||| | | || ||||||| ||| ||||| ||||||||
Sbjct 128693 ATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGA 128634
Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||||||||||| ||||||||||| || || ||||||||| || || |||||
Sbjct 128633 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 128581
Score = 138 bits (152), Expect = 2e-26
Identities = 185/254 (73%), Gaps = 4/254 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||||| |||||| |||||| |||||||||||||| |||
Sbjct 129226 TGACACCGGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGA 129167
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| |||||| | ||| ||||| | | |||| ||||||| ||||
Sbjct 129166 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGA 129107
Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
| |||| ||| || |||||||||||||| || |||||||| ||||||| ||||||
Sbjct 129106 GGGCGAC-CAAT-AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 129049
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||||| || || |||||| | ||| | | || || | |||||| |||||||
Sbjct 129048 CATGCCGAGTAGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGC 128989
Query 794129 CTCGATGATGATCT 794142
|| |||||||||
Sbjct 128988 ATCTGTGATGATCT 128975
>seq57
Length=873703
Score = 116 bits (128), Expect = 6e-20
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712
|||||||| || |||||| | ||||| ||| | || |||||||| || |||||| | |||
Sbjct 556963 AACTACCTGGATATCAAGGCTCTCCTTGATGTTGGTTGCAAGACTGTCGCCAACATGATC 556904
Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
||||||||||| |||||||| ||||||||||| || ||||||| | |||
Sbjct 556903 AAGGGCAAGTCTCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 556855
>seq434
Length=564148
Score = 109 bits (120), Expect = 9e-18
Identities = 179/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| || || | || |||| || ||||| ||||||||||| |||| ||||| ||
Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
|||||| ||||| || | ||| | ||| | ||||| | ||| | | ||
Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || |||||| ||||||||| | ||||| | || || || |||||||| |||||
Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| |||| |||||||||| | || ||||| || ||| || | | | || ||
Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCC 551857
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
||||||||||| || ||
Sbjct 551856 AGCATTGAAGAGAGTTGG 551839
>seq32
Length=575693
Score = 100 bits (110), Expect = 5e-15
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 2411364 GACCTCGTCGCAATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCC 2411423
||||||| || |||| ||| || ||||||||| | | || |||| |||||||||
Sbjct 141683 GACCTCGGCGGAATCTAGGAGGTCGATCTTGGAGTCCGGTTCACTGGAGCTCATCTTTTG 141742
Query 2411424 GTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCG---CTTGCGGTAGCC 2411480
||| | || || ||||||| || | || |||| || |||| || ||
Sbjct 141743 CGCCTCGCCCAGACCGGGCACCATGCCGTGCATCAAGTGGGCTCGGACCTTG---TAACC 141799
Query 2411481 CAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAA 2411540
| | |||||||| || ||||||| | |||||||||||| ||||| | || ||||
Sbjct 141800 GATCTTCGGCAGGTTTTCCAGCGCAAATGTAAAGATCTTGCGTTGGTCAAGGCCACCAAG 141859
Query 2411541 CTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAG 2411592
|| ||||||| ||||||| || ||||| || || ||||| || ||||||
Sbjct 141860 TTGCACGTCGACATCGAGGTACTCTTCGTCTAGAGCTTGCATCAGGGGGTAG 141911
>seq119
Length=260972
Score = 98.7 bits (108), Expect = 2e-14
Identities = 121/163 (74%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
|||||||||||| |||||||| || || || ||||||||| |||| || || ||| |||
Sbjct 253175 GTACTTGGTGACCGCCTTGGTTCCTTCCGACACGGCGTGCTTGGCAAGCTCACCGGGCAG 253234
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||||| ||| || | |||||||||||| |||| ||| ||| |||||| || |
Sbjct 253235 GATCAAGCGGACTGAGGTCTGGATCTCTCGGGAAGAGATGGTGGACTTCTTGTT-GTAGG 253293
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 253294 CAGCCAGCTTGGAAGCCTCGGTGGCGACTCGCTCGAAGATGTC 253336
>seq379
Length=261584
Score = 87.8 bits (96), Expect = 3e-11
Identities = 159/227 (70%), Gaps = 7/227 (3%)
Strand=Plus/Plus
Query 2019177 GCTTCG---AAAAGAATC-GAC-CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATG 2019231
|||||| ||||||| ||| ||||| || || ||||||||| | | ||||||||||
Sbjct 76194 GCTTCGCGCAAAAGAAAGTGACACTGCCCCCTGGTCGCCACAAGATCGTGATCCTCGATG 76253
Query 2019232 AGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTAC 2019290
| |||||| || | || || | || |||||||| | || ||| || ||||| | |||
Sbjct 76254 AAGCCGACAGCATGACATCCGGTGCACAGCAGGCGTTACG-TCGAACGATGGAGATCTAC 76312
Query 2019291 ACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTC 2019350
| |||||||| | || || | || |||||| ||| | | ||||||| | ||
Sbjct 76313 TCGAACACGACAAGATTCGCATTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCACTG 76372
Query 2019351 CAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCA 2019397
|| ||| ||||| ||| |||| | | || || || ||||||||
Sbjct 76373 CAATCCCGATGCGCTATCCTGCGTTACGGTCGACTTACAGACGCCCA 76419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916167150952055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |