Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypoxylon_20sp._20E7406B_20[genbank_20GCA_5F000931505.1_202015-02- 23] 745 sequences; 39,901,278 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq334 181 2e-39 seq57 116 6e-20 seq434 109 9e-18 seq32 100 5e-15 seq119 98.7 2e-14 seq379 87.8 3e-11 >seq334 Length=652976 Score = 181 bits (200), Expect = 2e-39 Identities = 217/293 (74%), Gaps = 9/293 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 |||||||||||||| || |||||||||||||| ||||||| ||| || ||| Sbjct 128867 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAG 128808 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 |||||||||||||||||||||||| ||| | |||| ||| || ||| | | ||| Sbjct 128807 AAGATGCCCTCGACGGCGGCAAAGGCGATCAAACGCTGGGCGAAGGTG-----GACTTCT 128753 Query 794497 TTGTT---GATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCG 794553 | || |||||| | || ||||| || ||||| | | | | || | |||||| Sbjct 128752 T-GTCAGCGATCCAGTGCAGGGCCCAGTCCGCCTTCCTGCGGATGCAAGGGATGGTGTCG 128694 Query 794554 ATGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGC 794613 |||||| ||||| ||| ||||| | | || ||||||| ||| ||||| |||||||| Sbjct 128693 ATGGCGTTGAAGAGATGGGTCTTCTGGGCGGGCTCCTTGATGTATGTGTCAATGAGGAGA 128634 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||||||||| ||||||||||| || || ||||||||| || || ||||| Sbjct 128633 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCA 128581 Score = 138 bits (152), Expect = 2e-26 Identities = 185/254 (73%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||||| |||||| |||||| |||||||||||||| ||| Sbjct 129226 TGACACCGGCCTTCTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGA 129167 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| |||||| | ||| ||||| | | |||| ||||||| |||| Sbjct 129166 GGGAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCGCGGTACACCTTCTCGTTACCGA 129107 Query 794011 G--CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 | |||| ||| || |||||||||||||| || |||||||| ||||||| |||||| Sbjct 129106 GGGCGAC-CAAT-AGACGGTCGGCGACGAACTCGATGTACTGCTTCATGAGGTTGGCGTT 129049 Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128 |||||||| || || |||||| | ||| | | || || | |||||| ||||||| Sbjct 129048 CATGCCGAGTAGGGCGCAGGGCAGTGCCTCCGTCAAGAATTCCTGCTCGATGGCGACGGC 128989 Query 794129 CTCGATGATGATCT 794142 || ||||||||| Sbjct 128988 ATCTGTGATGATCT 128975 >seq57 Length=873703 Score = 116 bits (128), Expect = 6e-20 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712 |||||||| || |||||| | ||||| ||| | || |||||||| || |||||| | ||| Sbjct 556963 AACTACCTGGATATCAAGGCTCTCCTTGATGTTGGTTGCAAGACTGTCGCCAACATGATC 556904 Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761 ||||||||||| |||||||| ||||||||||| || ||||||| | ||| Sbjct 556903 AAGGGCAAGTCTCCCGAGGAGATCCGCAAGACGTTCAACATCACGAACG 556855 >seq434 Length=564148 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || || | || |||| || ||||| ||||||||||| |||| ||||| || Sbjct 552096 CTGGTCTACGTATCTAGCAGTGTTATTGAAGACACGGAGCATGGGTACAATACCGTTCGA 552037 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 |||||| ||||| || | ||| | ||| | ||||| | ||| | | || Sbjct 552036 GGTGCCGTTAGTGCCGGCAATGTATGAGCCGGTAGCGCGAATGCGGTGGATGTTGAGACC 551977 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || |||||| ||||||||| | ||||| | || || || |||||||| ||||| Sbjct 551976 AATACCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTAAGGGTGTCGTAGATACCCTC 551917 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || |||| |||||||||| | || ||||| || ||| || | | | || || Sbjct 551916 AATGCTGTCGTCCTTCATGTCAACGAGGAAGCAGGATGAGAGCTGAGCCTGGGGTGTTCC 551857 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||||| || || Sbjct 551856 AGCATTGAAGAGAGTTGG 551839 >seq32 Length=575693 Score = 100 bits (110), Expect = 5e-15 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 2411364 GACCTCGTCGCAATCGTCGAGATCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCC 2411423 ||||||| || |||| ||| || ||||||||| | | || |||| ||||||||| Sbjct 141683 GACCTCGGCGGAATCTAGGAGGTCGATCTTGGAGTCCGGTTCACTGGAGCTCATCTTTTG 141742 Query 2411424 GTCCTTGGTGAGGCCCGGCACCAGCGGGTTGAGCAGGTGGATGCG---CTTGCGGTAGCC 2411480 ||| | || || ||||||| || | || |||| || |||| || || Sbjct 141743 CGCCTCGCCCAGACCGGGCACCATGCCGTGCATCAAGTGGGCTCGGACCTTG---TAACC 141799 Query 2411481 CAGCGCCGGCAGGTGGTCGCGCGCAAAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAA 2411540 | | |||||||| || ||||||| | |||||||||||| ||||| | || |||| Sbjct 141800 GATCTTCGGCAGGTTTTCCAGCGCAAATGTAAAGATCTTGCGTTGGTCAAGGCCACCAAG 141859 Query 2411541 CTGGGCGTCGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGCGGGTAG 2411592 || ||||||| ||||||| || ||||| || || ||||| || |||||| Sbjct 141860 TTGCACGTCGACATCGAGGTACTCTTCGTCTAGAGCTTGCATCAGGGGGTAG 141911 >seq119 Length=260972 Score = 98.7 bits (108), Expect = 2e-14 Identities = 121/163 (74%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| |||||||| || || || ||||||||| |||| || || ||| ||| Sbjct 253175 GTACTTGGTGACCGCCTTGGTTCCTTCCGACACGGCGTGCTTGGCAAGCTCACCGGGCAG 253234 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||| ||| || | |||||||||||| |||| ||| ||| |||||| || | Sbjct 253235 GATCAAGCGGACTGAGGTCTGGATCTCTCGGGAAGAGATGGTGGACTTCTTGTT-GTAGG 253293 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 | ||||| | ||||||||| ||| || |||| ||||| Sbjct 253294 CAGCCAGCTTGGAAGCCTCGGTGGCGACTCGCTCGAAGATGTC 253336 >seq379 Length=261584 Score = 87.8 bits (96), Expect = 3e-11 Identities = 159/227 (70%), Gaps = 7/227 (3%) Strand=Plus/Plus Query 2019177 GCTTCG---AAAAGAATC-GAC-CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATG 2019231 |||||| ||||||| ||| ||||| || || ||||||||| | | |||||||||| Sbjct 76194 GCTTCGCGCAAAAGAAAGTGACACTGCCCCCTGGTCGCCACAAGATCGTGATCCTCGATG 76253 Query 2019232 AGGCCGACTGCCTTACGTCGGCGGCCCAGCAGGCCCTCCGATCG-ACCATGGAAAAGTAC 2019290 | |||||| || | || || | || |||||||| | || ||| || ||||| | ||| Sbjct 76254 AAGCCGACAGCATGACATCCGGTGCACAGCAGGCGTTACG-TCGAACGATGGAGATCTAC 76312 Query 2019291 ACCAACACGACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTC 2019350 | |||||||| | || || | || |||||| ||| | | ||||||| | || Sbjct 76313 TCGAACACGACAAGATTCGCATTCGCGTGCAACCAGTCCAACAAGATCATCGAGCCACTG 76372 Query 2019351 CAGAGCCGTTGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCA 2019397 || ||| ||||| ||| |||| | | || || || |||||||| Sbjct 76373 CAATCCCGATGCGCTATCCTGCGTTACGGTCGACTTACAGACGCCCA 76419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916167150952055